Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_1119
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Entry
HDEF_1119 CDS
T00911
Symbol
nleD
Name
(GenBank) putative non-LEE encoded type III effector
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M91
Motif
Other DBs
NCBI-ProteinID:
ACQ67790
UniProt:
C4K5E7
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All DBs
Position
1046455..1049616
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AA seq
1053 aa
AA seq
DB search
MRRALKLNLTPLSFSSSSNSDTDIQSLVKKSSVNWIKNNHQLSFDGTNKNIYQRLEKALD
KIESTETGKELLNCIESVSRLKSEKLIIRLDSTELGVTAHCAENAENFRGTGSYLHCNLN
SVQEESIGKGIEQTELDACIVFHELLHVFHNLNGERLKVAVFQPEVETYSPFLLEEARTV
GLGSFSEEVFSENKFREEIGIPRRVSYAHESSLIHDDNTFTMFFENKQSHPLLRELTSRD
VHNRTAISGTSAQQNSSSDTQNTIPGAGSEAETANNTTQNTAAISNATAHAALALTSSER
GYDNPFKPLADNEPSQRVSIEEKSQKEKAENAIKHREDTDNQKRLTKSTTLKQRIEPQKI
ITSAGTELSAESLEPHQPVARFDVSDAALLEPWLMRLKNKNAVQRLEEYFKITQEILDTC
GLEDSKRLFAHPNLVKEAVCFAGHSLNGGMFKDAYLSPLKITYLSAASLAQEGKLPNEYY
SVWTHDKETFSPTRLLLNIYGKDYDSPPKISGKNDSESSPKRLQPLFSILKSAQSPSFKR
LGADLNHFLKDLKKEKSLNKDHIKNIMESFAAFSVQHSAPPGFLAANGKDEMTTVNSLDA
LKKSVKNVIENFEALKREDETLGEALEAQRTSEAVNNAQTQQKQAARQIASDRSLSAFFQ
ENQRKAVEFKQNKEREDRETQYKKTVESQQSEIKKSILSRKLESDMFAYNLHNENKLALE
QQASKKRAEEAKKLNDAGKKPALEGPNLSGARSASENNGALNGSGKNQSASALNEPSTSQ
GHLESVAENDSALNKELLIQTISSLPGAEQIERRDGDNIILDLKVDLHISNQTKIFNQKN
DKDGTARLEVTVKPEKTKTVYSAHNTTSIEPENSATGPQLATLYSLNKSDAGIGIHIKGA
DGSEMKTAWPWKAFDNFNYTSPQKNILITTGAIPNGDQPQALPNSFSEASVKGNISFNSE
NDIEKSRIEKKQPQWPEAQKNLAQLYQESERHREKAKQEKRWADAENQREKNEESRVSHE
RRDFLHKAAESRMVKNNLRETELKKSSNKNGVL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtgctcttaaactaaatttaacaccattaagtttttcctcatcttcaaattca
gatacggacattcaatctctggtaaaaaagtctagtgtaaactggataaaaaacaaccac
caactctcttttgatggtactaataaaaacatttaccagcgacttgaaaaagcactcgat
aaaatcgagtcgactgaaacaggcaaagagttgttaaactgtattgaatcagtatctcgg
ctcaagtcagaaaaattgataatacgtcttgattctactgagttgggtgtgacagcacac
tgtgctgaaaatgctgaaaactttcggggaaccggttcctatcttcattgcaatctgaat
tctgtgcaagaagaatccatcggaaaaggaatcgaacaaacggaattagatgcttgtatt
gtttttcatgaattacttcatgtttttcacaatttaaatggtgaacgtctcaaggttgca
gtttttcaaccagaagtagaaacttactctccatttttacttgaagaagcaagaaccgtt
ggattaggttcattttcggaagaagttttttcagaaaacaaatttcgtgaagagattggt
attccacgcagagtctcctatgctcatgaatcatctctcatacacgacgataatacattt
actatgtttttcgaaaataaacaatcacatccactgcttcgtgaacttaccagcagagat
gtgcacaacagaacagcgatttctggcacttctgcccaacaaaactcctcctcagatacc
caaaacacaatcccaggtgccggcagcgaagcagagacagcgaataacacgactcaaaac
accgcggccatatcgaatgccacagcacatgccgcgttggctttaacctcatcagaaagg
ggatatgataatccgtttaaaccccttgctgacaatgaaccctctcaacgggtgagcata
gaagaaaaaagccaaaaagagaaagcagaaaacgcgataaaacacagagaagacaccgat
aaccaaaaacgcctcaccaagagcacgacgttaaaacagcgtatcgagcctcaaaaaatc
ataacgagtgcaggaacagagttgtctgcagagtccttagagcctcatcagcccgtcgct
aggtttgatgtctctgatgcagcactgcttgaaccctggttaatgaggttaaaaaataaa
aatgcggttcaacgtttggaggaatattttaaaataacccaagaaatattagacacttgt
gggctggaagactctaaacgtctttttgcccacccaaatctggtcaaggaagcggtttgt
tttgctggacactctcttaatgggggaatgttcaaagatgcatacttatctccattaaaa
atcacttacctgagcgcggcctctctcgctcaagagggtaagcttcccaatgaatattat
tcggtctggactcatgataaagagacattttctccaacacgtttactactaaatatttat
ggcaaagactacgattccccaccaaagatttctgggaaaaatgactctgaatcaagtccc
aaaagattacaacccctgttcagcatacttaaaagtgctcaatcaccgtcattcaaacga
ttgggtgcagatttaaatcattttttaaaagatttaaagaaggaaaaatctttaaataaa
gaccacataaaaaacatcatggaaagttttgccgcgttctccgttcagcatagtgccccc
cctggatttttagcagccaatggaaaagatgaaatgactacagtcaattccctggatgca
ttgaaaaaatcagtaaaaaacgtaatagaaaattttgaagcacttaagagagaagatgaa
acattgggagaagcacttgaggcacaacgcacgtctgaggcagtcaataacgcacaaacg
caacaaaaacaagcagcaagacagattgcatccgacagaagcctttctgcgttttttcag
gaaaatcaaagaaaagcagtagaatttaaacagaataaagagcgagaagacagggagact
caatataaaaagacagtagagtctcaacaatctgaaataaaaaagagtattctcagcaga
aaacttgaatcagacatgtttgcgtataatcttcacaatgaaaataaactggcattagag
caacaggcttctaaaaagcgcgcagaggaggcgaaaaaattaaatgacgctggtaaaaag
cccgcattagaaggtccaaacctctcaggtgcacgaagtgcgtctgaaaacaacggcgca
ttaaatggctctggcaaaaatcaatccgcatcggcgttaaatgagccatctacttctcaa
ggtcacttagagagtgtggccgaaaatgattcagctctaaataaagagttgttgattcag
acaatttcttctcttcctggggctgagcaaatagagagaagagatggtgataatattatt
cttgaccttaaagtagatttacacatctctaatcaaacgaaaatttttaatcaaaaaaac
gataaagatgggactgcaaggctcgaagtgacggtgaaaccggaaaaaacaaagactgtg
tattctgctcataatacaacctctattgagcctgaaaattctgcgactggacctcagctg
gcgacactttatagtcttaataaaagcgatgcgggtattggaatacatattaaaggtgcc
gatggctcagaaatgaagacggcctggccttggaaagcctttgataatttcaattataca
agccctcaaaaaaacatattgattactacaggagccatacctaacggagatcagcctcag
gccttgcctaatagtttctccgaagcaagtgtcaaaggaaatatctcattcaattccgaa
aatgacatagagaaatcacgcatcgagaaaaaacagccacaatggcctgaagctcaaaaa
aatcttgcacaactttatcaagaaagcgaaaggcacagagaaaaagcaaaacaggagaaa
cggtgggcagatgcagagaatcaacgtgaaaagaacgaggagtccagagtatctcatgaa
aggcgagattttttacacaaagcagcagagtcacgcatggtgaaaaataatctaagggaa
acggagttgaaaaaatccagtaataaaaatggcgttctctaa
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