Halalkaliarchaeum desulfuricum: AArcSl_2110
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Entry
AArcSl_2110 CDS
T06283
Name
(GenBank) transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hdf
Halalkaliarchaeum desulfuricum
Pathway
hdf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hdf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcSl_2110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdf03021
]
AArcSl_2110
Transcription machinery [BR:
hdf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AArcSl_2110
Prokaryotic type
Archaeal type
TFB
AArcSl_2110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Trm112p
OrfB_Zn_ribbon
Sigma70_r4
Cyclin_N
LysW-like_globular
DZR_2
DZR
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AUX09735
UniProt:
A0A343TKW3
LinkDB
All DBs
Position
2116021..2117025
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AA seq
334 aa
AA seq
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MSETDTTIKQYADADERERSDRVGREQEQSDERRRVQTCPECDGRLETDTEHGETVCTDC
GLVVETDEIDRGPEWRAFDSAERDSKSRVGAPTTKMMHDKGLSTNIGWQDKDAYGRALSS
RQRRQMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDE
DLLPGRSIEGVATAALYAAARQAGTPRSLDEFTVVSRVEKMELTRTYRYVVRELKLEVQP
ADPESYVPRFVSQLGLSDETERRARELLRNAKDQGLTSGKSPVGLAAAGVYAAALLTNEK
VTQSQVGDVADISEVTIRNRYKELLEADPDGLYD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacagacacaaccatcaagcagtacgccgacgccgacgagcgggagcgatcg
gaccgcgtcggtcgagaacaggaacagagtgacgaacgtcgacgggtacagacctgtccg
gagtgtgacggacgtctcgagacggacaccgaacacggcgagacagtctgtaccgactgc
gggctggtcgtcgagaccgacgagatcgaccgcggtcccgagtggcgcgccttcgacagc
gccgaacgcgacagcaagtcgcgggtcggcgcgccgacgacgaagatgatgcacgacaag
gggctgtcgacgaacatcggctggcaggacaaggacgcctacggtcgggcgctttcgagc
cgccagcgccgccagatgcagcggctccggacgtggaacgaacggttccgcactcgcgac
tcgaaggagcgcaacctcaagcaggcgctcggcgagatcgaccgcatggcctcggcgctg
gggctgcccgagaacgtccgcgagaccgcctcggtcatctaccgccgtgcgctcgatgaa
gacctcctgcccggccgctcgatcgagggcgtcgccaccgccgcgctgtatgcggccgca
cgccaggccggtacccctcgcagcctcgacgagttcaccgtcgtctcgcgggtcgagaag
atggagctcacccggacgtaccgctacgtcgtccgggaactgaaactcgaggtccaaccc
gcagatcccgagagctacgtcccccggttcgtctcgcagctcggcctgagcgacgagacg
gagcgccgggcgcgggaactgctccggaacgcgaaagaccaggggctcaccagcgggaag
tcgccggtcgggctcgcagccgccggggtgtacgctgcggcgcttctcaccaacgagaag
gtgacccagagccaggtcggcgacgtcgccgacatctcggaggtgacgatccgcaaccgg
tacaaggagctcctggaggcggacccggacggtctgtacgactga
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