Hartmannibacter diazotrophicus: HDIA_4833
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Entry
HDIA_4833 CDS
T05217
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hdi
Hartmannibacter diazotrophicus
Pathway
hdi03030
DNA replication
hdi03430
Mismatch repair
hdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HDIA_4833 (dnaX_2)
03430 Mismatch repair
HDIA_4833 (dnaX_2)
03440 Homologous recombination
HDIA_4833 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdi03032
]
HDIA_4833 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
hdi03400
]
HDIA_4833 (dnaX_2)
Enzymes [BR:
hdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HDIA_4833 (dnaX_2)
DNA replication proteins [BR:
hdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HDIA_4833 (dnaX_2)
DNA repair and recombination proteins [BR:
hdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HDIA_4833 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_5
AAA_30
AAA_19
RuvB_N
AAA_14
AAA_18
TsaE
Rad17
AAA_24
AAA_2
SKI
SRP54
AAA_assoc_2
DUF815
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
SON58374
UniProt:
A0A2C9DDI5
LinkDB
All DBs
Position
1:complement(5291130..5293097)
Genome browser
AA seq
655 aa
AA seq
DB search
MDETAAGEETTVAKTDHGTGEAGLGLDHTHEVHAAPAPKGAGYRVLARKYRPSTFEDLIG
HGAMVRTLANAFETGRIAQAWMLTGVRGVGKTTTARILARALNYEIPGKIDRPTISMPEM
GTHCQAIMEGRHVDVIEMDAASHTGVGDIREITDAARYKPVSARYKVYIIDEVHMLSTAA
FNALLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRIDAGLLTEHLKKIAEAEA
VTVDDEALALIARAGEGSARDCLTIFDQAIAHGGGAVDTESLRAMLGLADRARIIDLFEF
VMKGDVAGALGELTDQYDTGADPAVVLSDLAAFVHLVTRMKLVPASASDPSLSEGERTRG
KEFSAGLSVRVLSRAWQLLLKGIAEVEQAARPLPAAEMVIVRLAYAADLPTLDEALKQLG
QATNGNGAGAPAPRGNGGGAGAPAGPTGSMAVRPAQMASSGGSGPVARLHTENRNIPAPA
MQPGQAQPDSIRLESFEAVVELAAARRDIGVKFALERNVRLVNFEDGRIEINPLPGANPN
LAGDLGRKLTDWTGKRWIVTVSREEGEATIQEKKEAARRSLLDDVRADPLIADILSKFPG
AEIVDVQVPEDEISVAEAALPVAPDDVPFDPDDPFDPDAYDLDAAFGDPVSDFDD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacagccgccggcgaggagacgaccgtcgccaagacggatcacgggaccggc
gaggctggcctcgggctcgaccatacgcacgaggtccatgccgcccccgcgcccaagggc
gccggctaccgggtgctcgcccgcaaataccgcccctccactttcgaggatctgatcggc
cacggcgccatggtgcgcacgctggcgaacgccttcgagaccggccgcatcgcgcaggca
tggatgctgacgggcgtgcgcggcgtcggcaagacgaccaccgcccgcatcctcgcccgc
gcgctcaactatgaaattcctggcaagatcgaccggccgaccatctcgatgccggagatg
ggcacccattgccaggcgatcatggaaggccggcatgtcgacgtgatcgagatggacgcc
gcctcgcacacgggcgtcggcgacattcgcgagatcaccgacgcggcgcgctacaagccc
gtttcggcgcgctacaaggtctacatcatcgacgaggtgcacatgctctccacggcggcg
ttcaacgcgctgctgaagacgctggaagagccgccggagcatgtgaagttcatcttcgcc
accaccgagatccgcaaggttccgatcacggtgctgtcgcgctgccagcgcttcgacctg
cgccgcatcgacgccgggctgttgacggagcacctgaaaaagatcgccgaggccgaggcg
gtcaccgtcgacgacgaggcgctggcgctgatcgcccgcgcaggcgagggctcggcgcgc
gactgcctcaccatcttcgaccaggcgatcgcccatggcggcggcgcggtcgacacggag
tcgctccgcgcgatgctcggccttgccgaccgggcgcgcatcatcgaccttttcgaattc
gtcatgaagggcgacgtcgccggcgcgctcggcgaactcaccgaccagtatgacaccggc
gccgacccggccgtcgtgctctccgaccttgccgccttcgtccatctcgtcacgcgcatg
aagctggtgccggccagcgcctccgatccctcgctgtcggagggcgagcgcacgcgcggc
aaggaattttcagccgggctctcggtgcgggtgctctcgcgcgcctggcagttgctcttg
aagggcatcgccgaggtggagcaggcggcccgtcccctgccggcggcggaaatggtgatc
gtgcggcttgcctatgcggcggatctgccgacgctcgacgaggcgctgaagcaactcggc
caggcgaccaacggcaacggcgctggcgccccggcgccgcgcggcaacggcggcggagcg
ggtgcgccggcagggccaactggatcgatggcggtgcgtccggcgcagatggccagcagc
ggcggcagcggccccgtggcgcggcttcacaccgaaaaccgcaacattcccgcgcccgcg
atgcagccggggcaggcccagcccgattcgatccggctcgaaagcttcgaggccgtcgtc
gagcttgccgccgcgcggcgcgacatcggtgtcaagttcgcgctggagcgcaacgtccgc
ctcgtcaacttcgaggacgggcggatcgagatcaatccgctgcccggcgcgaacccgaat
ctggccggcgatctcggccgcaagctcaccgactggacgggcaagcgctggatcgtcacc
gtttcgcgcgaggaaggcgaggcgacgatccaggaaaagaaggaggccgcccggcgcagc
cttctcgacgacgtgcgcgccgacccgttgatcgccgacattctttccaagtttcccggc
gcggagatcgtcgacgtgcaggtgccggaggacgagatctcggtggcggaagcagccctg
ccggtcgcgcccgacgacgtgcccttcgatcccgacgatcccttcgatcccgacgcctat
gaccttgacgccgccttcggtgaccccgtaagcgatttcgacgattag
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