Hyphomicrobium denitrificans ATCC 51888: Hden_1652
Help
Entry
Hden_1652 CDS
T01265
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hden_1652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_1652
Enzymes [BR:
hdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hden_1652
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hden_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecG_dom3_C
tRNA_anti-codon
RecG_wedge
SNF2-rel_dom
AAA_30
SecA_DEAD
TsaE
DUF3240
AAA_19
Senescence_reg
Motif
Other DBs
NCBI-ProteinID:
ADJ23459
UniProt:
D8JYK7
LinkDB
All DBs
Position
complement(1683965..1686079)
Genome browser
AA seq
704 aa
AA seq
DB search
MRPSFLNPLFASAQTISGIGPRFILLLKKCLALPPGVAEPRVIDLLWHMPTGIIDRRAEP
QLASAVPGSIVTLQLRVLKHKPAPRGNRKAPHKVTCEDDTGRIDLVFFHAERKFIEKQLP
EGEIRFVSGRIERYGEALQMAHPDYIVAPEARDDLPMLEPVYPLTAGLSGKIMVKAARQA
VDRVPELPEWQESRWLEARGWPAFKTAINRIHRPLDAPDVSNGAGPWQRLAYDELLAGQL
AFALVRQNMKAERGRRLAGKGDIRQKIADALPFKLTGSQQTALAEISDDLAASHRMLRLL
QGDVGSGKTVVALMTMAVAIEAGAQAALMAPTEVLARQHQETIAPLAEAAGLRIALLTGR
EKGKVRDAILERLASGETDILIGTHALFQSDVVFKDLALAVIDEQHRFGVHQRLALQAKG
ANNDTNVLVMTATPIPRTLLMTHYGDLDVSKLTEKPAGRKPITTKALPLESLERLVERIR
AQLAEGAQVYWVCPLIESSELTDLAAAEERFAHLRQIFGEGVGLLHGALSAKEKDETMAA
FAEGTIKILVATTVIEVGVNVPNANIMVIEHAERFGLAQLHQLRGRVGRGSRESFCMLVY
KAPLGETAGQRLKMMEETEDGFKIAEKDLELRGGGEILGARQSGAPGFRVAEVPGYDTLL
AAASDDAALILGSDPNLTSPRGQALRTLLYVFECDEAVRLFRAA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcgtttctcaacccgctgttcgcgtcggcgcagacgatctccgggatcggc
ccgcggttcatcctgcttttgaagaaatgcctggcgctgcctccgggcgtcgccgaaccg
cgcgtcatcgaccttctctggcatatgccgaccggcatcatcgaccggcgcgccgaacct
cagcttgcctcggccgttccgggaagcatcgtcacgctgcagctacgtgtgctgaagcac
aagcccgcgccgcgcggcaaccggaaggcgccgcacaaagttacctgcgaggacgacaca
gggcgcatcgatctcgtcttcttccacgccgaacgaaagttcatcgagaagcagcttccc
gaaggtgagatacggttcgtatccggacggatcgagcgttacggcgaagccctgcagatg
gcgcatcccgattatatcgttgcgccggaagcacgtgacgatctgccgatgctcgagccg
gtctatccgctgaccgccggactgtcgggcaagatcatggtcaaggccgcgcgtcaggcc
gtcgatcgcgtgcccgaacttcccgaatggcaggagagccgctggctggaagcgcgaggc
tggcccgccttcaaaaccgcgatcaatcgcattcaccggccgctcgatgcgccggatgtt
tcgaacggcgcaggcccgtggcagcgcctcgcctatgacgagcttctcgccgggcaactc
gcgtttgcgctcgtgcgtcagaatatgaaagccgagcgcggacggcgtctcgccggcaaa
ggcgacatccggcagaaaattgcagacgcgcttccgttcaagttgaccggatcgcaacag
acggccctcgccgaaatctcggacgatctcgcggcgtcgcatcgcatgctgcgcctgctg
caaggcgacgtcggctccggcaagacggtggtcgcgctgatgacgatggcggtcgcgatc
gaagccggtgcgcaggccgctttgatggcgccgacggaagtccttgcgcgccagcatcag
gaaaccatcgcgccgctcgccgaagccgcaggtctgcggatcgccctgctgacgggccgc
gaaaagggcaaggtacgcgatgcgatcctagagcgtctcgcatccggcgaaaccgacatt
ctgatcggcacgcacgcgctgtttcaatccgacgtcgtgtttaaagacctcgcccttgcc
gtcatcgacgagcagcatcgcttcggcgtgcatcagcgtctcgcgcttcaggcaaaaggc
gcgaacaacgatacgaacgtcctcgtcatgacggcgacgccgatcccgcgcacgctgctg
atgacgcattacggcgatctcgacgtttcgaagctcacggaaaaacccgcaggacgaaag
ccgatcacgacgaaggcgctaccgctggaatcgctcgaacgcctcgtcgaacgcattcgc
gcgcaactcgccgagggcgcgcaggtctattgggtctgcccgctgatcgaaagctccgag
ttgaccgaccttgccgcggcggaagaacgtttcgcgcatctccgccagattttcggcgag
ggcgtcggccttctgcatggcgcgctttcggccaaggaaaaagacgagacgatggccgcc
ttcgcggaaggcacgatcaagatcctcgtcgcgacgacggtcatcgaagtcggcgtcaac
gtgccgaacgccaacatcatggtgatcgagcacgccgagcgcttcggcctcgcgcaattg
catcagctgcgcggccgcgtcgggcgtggatcacgcgagtcgttctgcatgctcgtttac
aaagcgccacttggagagacggccgggcaacgtctcaaaatgatggaagagaccgaagac
ggcttcaagatcgccgaaaaggatctggaattgcgcggcggcggcgaaattctcggcgca
cgccagtcaggcgcgccaggatttcgcgtcgctgaagtgccgggctacgacacgctgctc
gcggctgcgagcgacgatgcggcgctgatcctcggcagcgaccccaatctcacctcgccg
cgtgggcaagcgctgcgcacgctgctctatgttttcgaatgcgatgaagccgtgcgcctg
ttccgcgccgcttaa
DBGET
integrated database retrieval system
