Hyphomicrobium denitrificans 1NES1: HYPDE_23738
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Entry
HYPDE_23738 CDS
T02646
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00470
D-Amino acid metabolism
hdt00550
Peptidoglycan biosynthesis
hdt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYPDE_23738 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPDE_23738 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_23738 (murD)
Enzymes [BR:
hdt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HYPDE_23738 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Precursor biosynthesis
Amino acid ligase
HYPDE_23738 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
IlvN
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGK56433
UniProt:
N0B0K7
LinkDB
All DBs
Position
232698..234113
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AA seq
471 aa
AA seq
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MIRATSFNGKTVAVFGLGSSGIASARSLVSGGATVAAWDDGEAGRNAAAQEGIPLVDLSQ
ADWSHFSALVLTPGVPLTHPEPHWTVKKARASGVEIIGDIEIFARERAAHAPNAPFIAIT
GTNGKSTTTALIAHILRHAGRDVQLGGNIGRAVLTLEEPAPERFHIVEMSSFQIDLTPTL
KPTVGVMLNMTPDHLDRHGTIENYAAVKERLVEGAEIAAVGIDDDFGLAMLQRRVRVGPA
IAFSAEKSLAPGYSLLDDTIICSNREALAVKLGSLRGIATLRGKHNAQNALAAVAAVREC
LNWLGQSSDIDWQGALSSFLGLPHRMEEIGRIGNVLFVNDSKATNADSTEKALLSFPRDV
FWIVGGRPKAGGIAALEKYFGGIAKAYLIGESSEDFARTLNGSVAFERSGTLDAAVSAAA
RDATASTGVEPVVLLSPACASYDQFRNFEIRGESFRQLVEALPGVVMRRAS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgccacgtccttcaacggcaagacagtcgctgtattcggtctcggtagctcc
gggattgcctcggcgcggtctctggtgtccggcggcgcaactgtcgccgcctgggatgat
ggcgaggccggccgtaacgcggcggcgcaggagggcattccgcttgtcgatctttcccag
gcggactggtcgcacttttcggcgctggttcttacgcccggagtgccgttgacgcatccc
gagccgcactggaccgtgaaaaaggcgcgcgccagcggtgtcgagattatcggcgatatc
gagatttttgcgcgtgagcgggccgcgcatgcgccgaacgcgccgttcattgcaatcacc
ggcactaacggcaaatcaacaacgacggcgcttatagctcacattcttcgccatgcgggc
cgcgatgtacaacttggcggcaacatcggccgagccgtcctgacgctcgaagaaccggcg
ccggagcgttttcatatcgtcgagatgtcgtcgtttcagatcgatctaacgccgacactg
aaaccgacggtcggcgtgatgttgaacatgacgccggatcatctcgaccggcacgggacg
attgaaaactatgcggccgtcaaggaacgccttgtcgagggcgctgagattgcggctgtc
gggattgacgacgacttcgggctggcgatgctgcaacgccgggtgcgcgtgggacctgcg
attgccttcagcgctgaaaaatcgctcgcgccgggatacagcctgctcgacgatacgatc
atctgcagcaatcgcgaggcacttgcggtcaagctcggatctctgcgaggcatcgcgacg
ctcagaggcaagcacaatgcgcagaacgcgctcgctgccgtcgccgcggtgcgcgagtgc
ctgaattggctcggccagtcgtcggacatcgattggcaaggtgcactttcgtcatttctc
gggttgccgcatcggatggaggagatcgggcggatcggaaacgttctgtttgtcaacgac
agcaaggcgacgaacgcggactcgaccgaaaaagcgcttctgtcttttccgcgcgacgtt
ttctggatcgtcggcggcaggccgaaggctggaggcatcgccgctcttgaaaagtacttt
ggcggcatcgcgaaggcttatcttatcggggaatcgagcgaggatttcgcgcgcactctc
aatgggagcgtcgcgttcgaacgcagcggtacgctcgatgccgccgtttcagccgcggcg
cgcgatgccacggcgagcacgggcgtcgagcctgtggttctgctgtcgccggcgtgcgcc
agctacgatcagttccggaacttcgaaattcgcggcgagagtttccgccaactcgtcgag
gcgcttccgggcgtcgtgatgcggagggcttcatga
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