Hyphomicrobium denitrificans 1NES1: HYPDE_24933
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Entry
HYPDE_24933 CDS
T02646
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00730
Thiamine metabolism
hdt00900
Terpenoid backbone biosynthesis
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
Module
hdt_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HYPDE_24933
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HYPDE_24933
Enzymes [BR:
hdt01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
HYPDE_24933
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AGK56671
UniProt:
N0B806
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All DBs
Position
476026..477969
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AA seq
647 aa
AA seq
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MDAVVNRSSKTPLLDRVNTPDDLRKLTESDLPQLAAELRTETIDAVSVTGGHLGAGLGVV
ELTVALHYLFDTPRDRLIWDVSHQTYPHKILTARRDRIRTLRQANGLSGFTKRTESEYDP
FGAAHSSTSISAGLGMAVARDMSGGDNNVVCVIGDGAMSAGMAYEALNNAGARNERLIVV
LNDNDMSIAPPTGALSSYLARTTSSASYFKVRDIAKQLAQRLPKSWERRAARMEEYTRNL
WQGGAWFEELGFYYVGPIDGHDLGQLLPVLKNVRDAKHGPILVHVMTKKGKGYAPAEASP
DKYHGVAKFNVVTGVQVKPQAAAPSYTRVFADSLIQEAKKDPKIVAITAAMPDGTGLDVF
GREFPDRTFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVR
FAIDRAGFVGADGATHAGSFDLAYLGCLPNFVIMAAADEAELKHMVATAVSIDDRPSAFR
YPRGEGTGVAMPEVGEVLPIGKGRILREGSTVALLSIGTRLGEAMKAADQLAALGLSTTV
ADARFMKPLDTDLIRQLAQNHEVLVTIEEGSVGGFGSHVLQYLADNGLLEHGLKVRAKVM
PDCFVDQDKPEAMYQKAGLSAGGIVETVRDALQLDKAASTREHRVRG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtcgtaaatcggtcatccaaaacgccccttctcgacagggtcaatactccg
gacgatctccggaagttgacggaatccgatttgccgcaactcgctgcggagctccgtact
gagacaatcgatgcggtgtcggtgactggcggacatctcggtgccggtcttggagtcgtc
gaattgacggtggctctgcattatcttttcgacacaccgcgcgacaggcttatctgggac
gtcagccatcagacgtatcctcataaaattctgaccgcccgtcgcgatcgtatccgaacg
ctgcggcaagcaaacggcctctccggtttcacgaagcgcacggagagtgaatacgatccg
ttcggcgcagcgcattcctcgacgtcgatttctgccggtctcggcatggccgtcgcgcgc
gacatgagcggcggcgacaacaacgtcgtctgtgtcatcggtgacggcgcaatgagcgcc
ggcatggcgtatgaagccctgaacaacgcgggcgcacgcaacgaacggctgattgtcgtt
ctcaacgacaacgacatgtcgatcgcaccgccgaccggcgcgctctcatcctatctggcg
cgcacgacatcgagtgcgtcctatttcaaagttcgcgacatcgccaagcagcttgcgcag
cgcctgccgaagagctgggaacgtcgcgcagcgcgtatggaagaatatacgcgcaatttg
tggcagggcggggcgtggttcgaagagctggggttctactatgtcggtccgatcgacgga
cacgacctgggccagttgctgcctgtgctgaagaacgtccgggacgccaagcacgggccg
atcctcgttcacgtcatgacgaagaagggcaaagggtacgcgcccgccgaagcctcgccc
gacaaatatcacggcgtcgcgaaattcaatgtggtcacgggtgtgcaggtgaagccgcaa
gcggcagcgccatcctatacgcgggtttttgcggacagcctcattcaggaagccaaaaag
gatccgaagatcgtcgcgatcacggcggcgatgccggacggcaccgggcttgacgtcttc
ggccgcgaatttcccgatcgtacgttcgacgtggggatcgccgagcagcacgccgtgacc
tttgccgccgggttggcgacggaaggcatgaagccctttgctgcgatctattcgacgttc
ctgcagcgcggctacgatcaggtcgtgcacgacgtggcgattcagagcctgccggtacgg
ttcgcaatcgaccgcgccggattcgtcggggccgatggcgcgacgcatgccggctcgttc
gatctcgcttacctcggttgcctgccgaacttcgttatcatggcggcggcggatgaagcc
gagctgaagcacatggtggcgacggccgtttcaatagatgatcgtccgtcggcgttccgg
tatccgcgcggggagggcaccggcgtcgcgatgcctgaggtcggcgaagttcttccgatc
ggcaagggccgcatcctacgcgagggttcgaccgttgcgctgctttcgatcggtacacga
ctcggcgaagccatgaaggcggccgatcaactcgccgcactcggtctctcgacgaccgtc
gccgatgcccgcttcatgaagccgctcgatacggacctcatccggcaattggcgcaaaat
cacgaggttctcgtcaccattgaggaagggtcggtcggcgggttcggcagtcatgtgctg
cagtatctggccgacaacggtctgctcgaacacggtcttaaggtgcgcgcgaaggtcatg
ccggattgcttcgtcgatcaggacaagcccgaggcgatgtatcagaaggcagggctatcg
gctggcggcattgtcgaaaccgttcgcgatgcgctgcaactcgacaaagcggcaagcacg
cgtgagcatcgagtccgcggttag
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