Hyphomicrobium denitrificans 1NES1: HYPDE_27793
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Entry
HYPDE_27793 CDS
T02646
Name
(GenBank) DNA polymerase III chi subunit HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03030
DNA replication
hdt03430
Mismatch repair
hdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPDE_27793
03430 Mismatch repair
HYPDE_27793
03440 Homologous recombination
HYPDE_27793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdt03032
]
HYPDE_27793
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_27793
Enzymes [BR:
hdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPDE_27793
DNA replication proteins [BR:
hdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPDE_27793
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPDE_27793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AGK57238
UniProt:
N0B2N0
LinkDB
All DBs
Position
1036799..1037245
Genome browser
AA seq
148 aa
AA seq
DB search
MDVYFYHLEHQTLERVLPSLLEKTLARGWRAVVQAGSEDRLEAIDMALWTYADDSFLAHG
TARIGHASLQPVYLTLGSENPNGAGVRFFVDGAEAEEFVGAERFVYVFGGHDAEALASAR
GQWTAAKAAGCTVTYWQQSPSGRWEQKA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctatttttatcacctcgaacatcagacgcttgagcgcgtgctacccagtctt
cttgaaaagacgttggcgcgcgggtggcgtgccgtcgtgcaggccggtagcgaagatcgt
cttgaggcgatcgacatggcgctctggacatatgccgacgacagctttctggcgcatgga
acggcgcgcatcgggcatgcgagtttgcagccggtctatcttacgctcggcagtgaaaat
cccaacggggcgggcgtgcgctttttcgtcgatggggcagaggcggaggaattcgtcggc
gccgagcgctttgtctatgtgttcggcggccatgatgccgaggcgctggcgtcggcgcgt
ggccaatggactgcggcgaaagctgcagggtgcacggtcacctattggcaacaatcgcca
agcgggcgctgggagcaaaaagcctaa
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