Herbiconiux sp. SALV-R1: HL652_16035
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Entry
HL652_16035 CDS
T06594
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
hea
Herbiconiux sp. SALV-R1
Pathway
hea02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HL652_16035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hea02000
]
HL652_16035
Transporters [BR:
hea02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HL652_16035
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QJU54980
UniProt:
A0A6M5IZ03
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Position
3361168..3362916
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AA seq
582 aa
AA seq
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MMTAVHSVPATESAAGPLPGSGGAGHRAPSGGPGRRRRPGRPFWLLFVPAAAVVAIYFVV
PLAQVVWRSFSDPELGLSNYAALLTDGVTVTVILRTLGVALLVTAVTLLLAYPYAYAMTK
VGPTGRAVMLALALLPFWTSLLARNFAWLLLLQDGGPVQSFFAFFGNDQVVLYGSLGGVA
VAMSQVLLPYMILPLYSSMQSIDRRLLTAGRSLGANPLKAFAKIYFPLSVPGIVAGVLLV
FVLSLGFYVTPALIGSPQQSLIAQLLASRTRELVDFGGAGALGTVVLVIAMILLLVISRF
GRGAGAVGGATAVTGGNRRSTLGWPGRVVATVVGFLLLAPTLVVIPMSFSAGNTFQFPPK
EWSLRWYESFFTSQKWQYALQNSITIGLLVMLTATVLGTAAAIFIHRRRGRLASGVNSFL
TLPLAVPNIVIAVAIYIVFLQWGLAGTIGGFVAAHTVLAIPFVLVAVGASLSGYDRRLGD
AAASLGAPGLSTFRKITLPLILPGVLSGAIFAFVTSFDEVVVALFLKSPRLTTLPALMYD
SVTLEIDPTIGAASSLVVVATSILIIVPQLIQNHRARKRAAL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgccgtgcactccgtgcccgcgacggagagcgccgccggaccccttcccggg
tccggcggcgccgggcaccgtgccccctccggtgggcccggccgccgccgccgccccggc
cgcccgttctggctgctgttcgtcccggcggccgccgtggtcgcgatctacttcgtggtc
cccctggcccaggtggtctggcgctcgttcagcgaccccgaactgggactgtcgaactac
gccgccctgctcaccgacggggtgacggtcacggtcatcctgcgcaccctcggggtggca
ctgctcgtgacggccgtcaccctcctgctcgcgtatccctacgcctacgccatgaccaag
gtggggccgaccggtcgcgccgtcatgctcgcgctcgcgctgctcccgttctggacgagc
ctgctcgcccgcaacttcgcctggctgctcctgctgcaagacggcgggccggtgcaaagc
ttcttcgccttcttcggcaacgaccaggtggtgctctacggcagcctcggcggtgtcgcc
gtcgccatgtcgcaggtgctgctgccctacatgatcctccccctctacagctcgatgcag
tcgatcgaccgccgcctgctgaccgccggccgcagcctcggcgcgaacccgctcaaggcc
ttcgccaagatctacttcccgctctcggtgcccggcatcgtcgccggtgtgctgctggtg
ttcgtgctgagcctcggcttctacgtcacccccgccctcatcggctcgccccagcagtcg
ctcatcgcgcagctgctcgcctcccgtacccgtgagctcgtcgacttcggcggtgccggg
gcgctcggcacggtcgtgctggtcatcgccatgatcctgctcctggtcatctcgcgcttc
ggccggggcgccggcgccgtcggcggggccaccgccgtcacgggcgggaaccggcgcagc
accctgggctggccgggccgcgtcgtggcgaccgtggtcggcttcctgctcctcgccccc
accctggtggtcatcccgatgagcttctcggccggcaacaccttccagttcccaccgaag
gagtggtcgctgcgctggtacgagtccttcttcacctcgcagaaatggcagtacgcgctg
cagaactccatcaccatcgggctgctcgtcatgctcacggccacggtgctgggcaccgcg
gcggcgatcttcatccaccgtcgccggggccgtctcgcgtcgggcgtgaactccttcctc
accctgccactcgcggtgccgaacatcgtgatcgcggtggccatctacatcgtgttcctg
caatggggcctggcgggcaccatcggcgggttcgtcgcggcacacaccgtgctggccatc
cccttcgtgctggtcgcggtcggtgcgtcactgagcggttacgaccggagactgggcgac
gccgcagcgagcctcggagcccccggcctgtcgaccttccgcaagatcacgctgccgctc
atcctgcccggcgtgctctccggcgcgatcttcgccttcgtcacgagcttcgacgaggtg
gtggtggcactgttcctcaagtccccccgcctcaccaccctgccggcgctcatgtacgac
agcgtgacgctcgagatcgacccgacgatcggggcggcgtcgtcgctcgtggtcgtggcg
acgagcatcctcatcatcgtcccccagctcatccagaaccaccgcgccagaaagagggca
gcactgtga
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