Herbiconiux sp. SALV-R1: HL652_16170
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Entry
HL652_16170 CDS
T06594
Name
(GenBank) FadR family transcriptional regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
hea
Herbiconiux sp. SALV-R1
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hea03000
]
HL652_16170
Transcription factors [BR:
hea03000
]
Prokaryotic type
Helix-turn-helix
GntR family
HL652_16170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
FadR_C
HTH_11
TrmB
HTH_41
HTH_Crp_2
HTH_CodY
LexA_DNA_bind
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QJU55001
UniProt:
A0A6M5J071
LinkDB
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Position
3391943..3392662
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AA seq
239 aa
AA seq
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MAEFVPLMRQPSLAVRVTEELLEAIAAGRFRPGERLPSERDMSDQFGVSRTVIREAVRGL
HAKGVLEITTGKGVQIATVSSSRVTEALELYLRGAQSQEIIKPVHIAEVRETLETRLVEI
ACERATADDLAAIEREHELMSAAADPETAARHDAEFHRLLAVATHNALYLTLVESINATM
RTIRANSFTVEGRLAVALEEHEAVLNAVRARDAAASREAMQRHLDDSQKFYGRGSGATS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcgtgcccctgatgcggcagccgtcgctcgcggtgcgcgtcaccgaggag
ttgctcgaggcgatcgccgcgggtcgcttccggcccggtgagcggcttccgagcgaacgc
gacatgagcgaccagttcggggtgtcgcgcacggtcatccgcgaggcggttcgtgggctc
cacgccaagggcgtgctcgagatcaccacgggcaagggcgtgcagatcgccaccgtctcg
tcgagcagggtcaccgaggcgctcgagctgtacctgcgcggggcgcagtcgcaggagatc
atcaagccggtgcacatcgccgaggtgcgcgagacgctcgagaccaggctggtggagatc
gcgtgcgagcgcgccaccgccgacgacctcgcggccatcgagcgcgagcacgagctcatg
tcggcggccgccgaccccgagacggcggcacggcacgacgccgagttccaccggctgctc
gcggtcgccacccacaacgcgctctacctcaccctggtcgagtcgatcaacgcgacgatg
cgcaccatccgtgcgaacagcttcaccgtggagggccggctcgccgtcgccctcgaggag
cacgaggccgtgctgaacgccgtgcgagcccgcgacgcggcagcgagccgggaggccatg
cagcggcacctcgacgactcgcagaagttctacggtcggggttcgggggcgacttcgtga
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