Candidatus Hydrogenosomobacter endosymbioticus: HYD_6300
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Entry
HYD_6300 CDS
T07863
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hec
Candidatus Hydrogenosomobacter endosymbioticus
Pathway
hec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYD_6300 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hec03400
]
HYD_6300 (uvrB)
DNA repair and recombination proteins [BR:
hec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYD_6300 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYD_6300 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Helicase_C_2
AAA_22
HEM4
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BDB96497
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All DBs
Position
712212..714182
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AA seq
656 aa
AA seq
DB search
MFKLKSEFFPSGDQPEAIRELLCGLYQKQKNQVLLGVTGSGKTFTIANVIQDAGRPTLIF
APNKTLAAQLYGEMKEFFPENAVEYFVSYYDYFQPEVYIPKTNTYIEKDASINERIDRMR
HSATRALLERRDAIIVASVSCIYGIGAVESYSGMSFAISVGDKVSFRELFARLTEIQYKR
NDISFVRGMFRVRGDNVDIFPSHYENRAWRLQFFGNELERIFEIDVITGDKEASLDSVRI
FPNSHYSTPGPTVIQALREIKIDLDARLTELKSENKLVEEQRLRERVNYDIEVMQSTGTC
PGIENYSRYLTGRSPGEPPPTLFEYLPRDALLIVDESHVSIPQLRAMYNGDQARKSNLSD
YGFRLPSCKDNRPLKFDEWEALRPDTIFVSATPGSWELEQVEGVITEQVIRPTGLLDPEC
FVRPTEYQVDDLIGELRSAISSGGRALVLTLTKKMAEDLTEYLSAASIKVRYMHSDIDTL
ERIEILQDLRRGEFDVLVGINLLREGIDLPECSLVAILDADKEGYLRSSSSLIQIIGRAA
RNVDGKVILYADKITKSMRYALEETSRRRARQMEYNNKHNITPRTICRVRKDIVNFCDLE
SGLQEESKIVIKDAGNESGIAMLSTLELEKKMVAAAENLEFEEAARIRDMLKKRRK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaagttaaagtctgagtttttccccagcggagatcagccggaagcaataagggag
cttctttgtggcctataccaaaagcagaaaaatcaggtgcttcttggcgttactgggtct
ggaaaaacttttacaatagcaaatgtcatacaggacgctggacggccgactcttatattt
gcgcctaataagacgcttgcggcccaattatatggagagatgaaagaattttttccagaa
aatgcggtcgagtatttcgtgtcttattatgattactttcagccagaagtgtatattcca
aaaacaaacacatatattgaaaaagatgcgtcaattaacgagcgtatagacagaatgcgg
cacagtgctacgcgtgcattgctcgaacgcagggacgcgataatagttgcaagtgtttct
tgcatatacggtataggagcggttgaatcgtactctgggatgtctttcgcgatatctgtt
ggcgataaagtgtcttttcgtgagctgtttgctaggcttacagagatacagtataagcgt
aatgatatatcatttgtgcgcggcatgtttagggtgcgtggcgataatgtggacatattc
ccatctcactacgaaaatcgggcatggaggcttcagttttttggaaatgagcttgagcgg
atatttgagatcgacgtgatcacaggagataaagaggctagcctagattcggttcgcatt
tttccaaatagccactattccactcctggcccaacagttattcaagctttgcgagaaata
aaaatagacctggacgcaagacttactgagctgaaatcagaaaataagctcgttgaagaa
cagcgcctgcgtgagcgggtgaattatgacatagaagttatgcagtccaccggaacatgc
ccaggtatagaaaattattctcgttatttaacagggaggagtcccggagaacctccccca
acactttttgaatatttgccgcgggatgctcttcttattgtagatgaaagtcatgtcagc
attccacagcttcgagcgatgtataacggggatcaggcaagaaagtctaatttgtctgat
tatgggtttcgtcttccatcttgcaaagacaatcggcctttaaaatttgatgagtgggag
gcgcttcgtccagatactatatttgtatctgctaccccaggttcatgggagctggaacag
gtagaaggagttataacggaacaagttattcgcccaacaggtctgctggaccccgagtgt
tttgtccgtccaacagaatatcaggtggatgatcttattggtgaattgagatccgccata
tcatctggaggaagagctctggtcttaacgctaacaaaaaagatggcggaggatttaacg
gagtacttaagtgctgcgtctattaaagttcgatatatgcattctgatatagacactctt
gaaagaatagaaattttgcaggatttgcgaagaggagagtttgacgtattggtaggaata
aatcttctgcgtgaggggatagaccttccggaatgcagtcttgttgcgattcttgacgct
gataaggaaggatatcttcgctcatcgtcttctttgattcagataatagggagagctgcg
cgaaacgtagatggtaaagtgattttatatgcagacaaaataacaaaatctatgcgctat
gcccttgaggaaacctctagaagaagggctagacagatggaatataataataaacacaat
ataacgcctaggaccatatgccgtgtgcgcaaagatatagtcaatttctgcgacttagaa
agcggtttacaagaagaatcaaaaatagtgattaaagatgcgggaaatgaatctggaata
gctatgctttcaactttagaattagagaaaaaaatggttgcggctgctgaaaatcttgaa
tttgaagaagcggctaggattagggatatgttaaaaaaaaggcgaaaataa
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