Herbaspirillum sp. meg3: hmeg3_14875
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Entry
hmeg3_14875 CDS
T05024
Name
(GenBank) diguanylate cyclase response regulator
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
hmeg3_14875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hee02022
]
hmeg3_14875
Enzymes [BR:
hee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
hmeg3_14875
Two-component system [BR:
hee02022
]
CheA family
WspE-WspRF (chemosensory)
hmeg3_14875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
AAA_lid_3
Motif
Other DBs
NCBI-ProteinID:
ASU39446
UniProt:
A0A223PBJ6
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All DBs
Position
complement(3307784..3308818)
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AA seq
344 aa
AA seq
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MESPTLGNNPDSELGLQLPPADYKIMVLLVDDQAMVGEAIRRALLTESDIDFHYCPRAED
AVRVAEKTQPTVILQDLVMPGVDGLTLVRQYRSNPLTMDIPIIVLSSKEDALVKRDAFAT
GVNDYMVKLPDTIELIARIRYHSRSYNNQLQRDAAYRALRESQQQLQKTNFELQRLTNTD
GLTSIANRRYFDDYLNAEWKRAKRVQQEISLLLIDVDNFKLYNDNYGHVAGDQVLKSVAR
AMESSAVRSSDLSARFGGEEFAVILPSTDEAGAVAAGDKLREMVQALHIGHAHSTTSEWL
TISVGVATMIPKDEQTQSDLIRLADKRLYKAKQQGKNRVIAKDD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaccgactctgggcaacaaccccgacagcgaactgggcttacagctgccgccg
gcggattacaagatcatggtgttgctggtggatgaccaggcgatggtcggtgaagcaatt
cgccgtgctttgctgactgaatccgacatcgattttcactattgcccgcgcgcggaagat
gcggtgcgcgtcgccgagaaaacccagcctaccgtgatcctgcaagatctggtcatgccg
ggtgtcgatggtctgacgctggtcaggcaataccgcagcaatccgctgacgatggacatt
ccgatcatcgtgttatcgagcaaggaagatgcgctggtcaaacgtgacgcctttgccacc
ggcgtcaacgactacatggtcaagctgccggacaccatcgagctgattgcgcgtatccgc
taccattcgcgttcgtacaataatcaactgcaacgcgatgccgcctatcgtgcattgcgc
gaaagccagcagcagttacaaaagaccaattttgaattgcagcggttgaccaataccgat
gggctgaccagtatcgccaatcgccgttattttgatgactatctcaacgccgaatggaag
cgtgccaagcgcgtgcagcaagaaatttcgctgctgctgatcgacgtcgacaacttcaag
ctgtacaacgacaactatggtcatgtggccggcgatcaggtattgaagagcgtcgcgcgg
gcgatggaatcgagcgcggtgcgttcatccgatctgagcgcgcgttttggcggtgaagag
ttcgctgtgattttgccgagtaccgatgaagcgggagcagtggcggcgggcgacaagttg
cgtgaaatggtgcaagccttgcatattggtcacgcccattcgacaaccagcgaatggctg
actatcagtgtgggtgtcgcgacgatgattccgaaagatgagcagacgcagagcgacttg
attcgtctggctgacaagcgtctatacaaggccaagcagcagggcaagaatcgggtgata
gcgaaagacgactga
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