Herbaspirillum sp. meg3: hmeg3_22430
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Entry
hmeg3_22430 CDS
T05024
Name
(GenBank) glucoamylase
Organism
hee
Herbaspirillum sp. meg3
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_15
TREH_N
VMAP-M7
Motif
Other DBs
NCBI-ProteinID:
ASU41604
UniProt:
A0A223PHN9
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Position
complement(4990243..4992081)
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AA seq
612 aa
AA seq
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MDTPSNDTSTGVSNDGDRPSTSSLDLGVIGNCSYSALIDKLGRIVWCCLPRFDGDPVFNA
LLDPDESGSLWSFELENFSHSEQWYEPNTAVLKTRLYDTLGQGVEITDFAPRFPSRGRFF
RPQTLVRRVLPLNGAPRLRVLLRPRFDWGREVPEITRGSNHVRYVGSEMTLRLNTDAPIS
YLLDETAFVISRPFNFLLGPDETLTGGIGDTARSFEQETVTYWRNWSRSLATPLEWQAAV
IRAAITLKMSVYEDTGAIIAAMTTSVPEAPGSARNWDYRYCWLRDAFFVVRALNSISELG
TMEDYLRWLTNVVVRSAGGHVQPLYGIGLEEALPEQILDHLPGYRHHAPVRVGNQAYEHF
QHDVYGNIILGAAQAFHDVRLHHRAGIEQFKHLEAVGERAFEMYDRPDAGMWELRTRSRI
HTSSALMSWAACDRLAKIAVRLELTDRATYWIERADMIGKRILTEAWNEERQTYAESFGG
RDLDASVLLMVEVGLIAPTDKRFIATVDALEKYLCDGPYMRRYEAPDDFGRPETAFNICT
FWRIDALARIGRKEQAREIFEAMLAARNHVGLLSEDTHPVTGQMWGNFPQTYSMVGIINC
AMRLSASWESVI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atcgacactcccagcaacgatacctccaccggcgtcagcaacgacggcgaccggccttcc
acctcatctctcgatctcggcgttatcggcaactgttcttacagcgcgctgatcgacaag
ctcggccgtatcgtctggtgttgtctgccgcgattcgacggcgacccggtcttcaacgcc
ttgctcgaccccgacgaaagcggcagcttgtggagtttcgagctggagaacttttcgcac
agcgagcagtggtacgagccgaatacggccgtgctcaaaacgcgtctctacgacacgctc
gggcagggcgtcgagatcaccgactttgccccacggttcccaagccgcggccgcttcttc
cggccgcagacgctggtgcgccgcgtgctgccgctaaacggtgcgccgcgcctgcgcgtg
ctgctgcgtccgcgtttcgactggggacgtgaagtgccggaaattacgcgcggcagtaat
cacgtgcgctacgtcggttcggaaatgacgctgcggctcaacaccgacgcgcccatcagt
tatcttctggatgaaacggctttcgtcatcagccgcccgttcaacttcttgctcggcccc
gacgagacgctgactggcggcatcggcgacaccgcacgcagttttgagcaggaaaccgtt
acctactggcgcaactggagccgcagtctcgccacaccgctggagtggcaagccgcggtc
atccgcgccgccatcacgctcaagatgtcggtgtatgaagacaccggcgccatcattgcc
gccatgaccaccagcgtgccggaagcaccgggcagtgcgcgtaactgggactatcgctat
tgctggctgcgcgacgccttcttcgtggtgcgcgcgttgaacagcatttccgaactcggc
accatggaagattatctgcgctggctcaccaatgtcgtggtgcgctcggccggcggccac
gtgcagccgctgtatggcatcggcctcgaagaagccttgccggaacagatcctcgatcac
ttgcccggttatcgccatcacgcgccggtacgtgtcggcaatcaggcctacgagcatttc
cagcacgacgtctacggcaacatcattctcggtgcagcgcaggccttccacgatgtccgc
ctgcatcatcgcgccggcatcgagcagttcaagcatctggaagccgtcggtgagcgtgcc
tttgagatgtacgaccggcctgatgccggtatgtgggaattgcgcacgcggtcgcgcatc
catacctcgtctgcgctgatgagctgggccgcctgcgacaggctcgccaagatcgccgta
cggcttgagctgaccgatcgcgccacgtactggatcgagcgtgccgacatgatcggcaag
cgcatcctgaccgaagcctggaatgaagaacgtcagacctatgccgaaagcttcggtggc
cgcgacctcgatgcaagcgtcttgctgatggtggaggtcgggctgattgcgccgaccgat
aaacgcttcatcgcgactgtcgacgcgctggaaaaatatctgtgcgacggcccttacatg
cgccgttacgaagcaccggatgatttcggccgccctgaaaccgctttcaacatctgcaca
ttctggcgcatcgacgcacttgcccgcatcggccgcaaggagcaggcgcgcgaaattttc
gaagccatgctggcggcacgcaatcacgttggtctgctgtccgaagacacgcatccggta
accggccagatgtggggcaatttcccgcagacctattcgatggtcgggatcatcaattgc
gcgatgcgcttgtccgcatcgtgggagagcgtgatctga
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