Herbaspirillum sp. meg3: hmeg3_23655
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Entry
hmeg3_23655 CDS
T05024
Name
(GenBank) hypothetical protein
Organism
hee
Herbaspirillum sp. meg3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ASU40999
UniProt:
A0A223PFZ6
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All DBs
Position
5252762..5258038
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AA seq
1758 aa
AA seq
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MPLSPTTTRQQSGNSDTRLQTPASEHSHDHPGGCMFQPSFSGGASRVLLSSLMSPWRHMH
IAARSVRSGLVAMVATLMLMTLAGWFNPVSAQGVSACGTITGTVASGQQIQLHFDTCSQT
GWNGILTNPTNGSIVAANPTAGDTNTYITYSNNGNGQLSDTFTAKDESNNTITFNITISA
PTSPLTVSPAASANPTVGQSFTQQMSTTGGTSPYTYALVAGSLPPGITFNGSTGAFGGSA
TASGGYNFSIKVTDSAATPNTFTKPYQMNVGAATLSISPGTLPNGTATVAYSQQMSASGG
IAPYSYAMDTTNFPGGGTPLSISSTGLISGTPTTAGTATFRIVVTDSTSGTPAIATANYS
MTIDPLPPPVAGPVSLPVAYNSSLNPVTLSLSGGAASSVAIGTAPLHGSTSVSGTTIKYT
PTTGYNGPDSFTYTATNVGGTSSPATVSVTMTAPTITVSPSGTALSATTISAFSQSFSAS
GGSGPYTYSQTGTLPTGLSFNAGTATLSGTPTQAGTFSFTITATDSSTGTAATGSRNYTL
NVTAPTITVSIGASTLQRGVPVTQQATASGGNGTYTYAVTGGALPAGLNLNPATGAITGT
PSAAGAYSFTLTATDGNGFTGAQGFVGTVGAGAPIVSSSSATVAYNAGGSSYTIPISATG
GTPSSLTVTGAAAHGTVSPLSVSAFSYTPTTGYAGADSFTYTATNAVGTSGTATVTITVS
PPTLTLSPASVALTAAVGTPYSQTFSASGGVPAYVYAQTGSLPTGVTFNAGTGVLSGTPA
QAGTFNFTISVLNDGSTGTGIPFTTSRTYTLTIGAPTLGISPSSLTQPQVGISFSQQLST
SGGTAPYTYTVTAGATPGGLNVTSGGLISGTPTTAGAYSFSVTSTDSFGFNTTVSYTGTV
GAGKPVTANSSATVSYSSSNNAIPVSITGGTPTSLTITTAAAHGSATPSGITGFTYTPTA
GYSGTDTFSYSATNAIGTSTVATVTVTIGAPTVVITPSAAWVATQGTSYTQTLTWSGGTA
PYSTITVTGLPTGLTYSTSTTDATISGTPTQNGSFSLTASAIDSSTPTPVTKSQNFTLTV
GQAVPVAVADSATTNANQAVTIPVTNNDTSAITSIAIVTTPLHGSATVSGLGVIYTPNTN
YFGSDSFTYTATGPGGTSSPATVSVTVTALAVPTSPPQSASVQAGQSVTLHVGAAAANGP
ITAVTIVGAPASGSAVVNGTDIVYTAIAGFTGNVQFTYTLSNVFGVSALVTATVSASAVP
VASNQSVAVAAGVTATVDVTAGATGGPFTAAAIVAVNPATAGTATMVNAASSGSPSYRLN
FTPAAAFSGVATVTFTLSNASGPSAAATVTITVGARTNAANDPQVKGLVAAHGQTASRFA
TAQLGNFSRRLESLHGMGWAPSSFGLGFGQPTAPVKPLLAQWNEDEVDRVVGSPLQAGMR
KVGWPLLSQAAKPETKPVAESSRDLAALPELPSRREQSRQELSLWIAGTVDFGQRNSNGQ
QEGFRFTTNGVSMGADYRLSDQLTIGVGTGYSRDRSDIGDNGSKTIGQAVVATVYGSVRP
TPNIFIDGMLGYGALNFDSTRYVTDDGSFATGQRGGKQLFVALSSGYEFRGESWMWSPYG
KVDLTSTTLAQYTEAAAGNNALTYFKQRVRTSSGTFGLRTEGQYLSRFGMWTPRARLEYR
RQFSGAGEAGISYADLASSGPAYVIRSDDSFTGNWTAGLGMRLLLSNGTSLIVDYSSNLN
VGQGRYSSVLLGINVPLR
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttcaccgacaacaacccgacagcaatccggcaacagcgacaccagattgcaa
acaccggcttcagaacactcgcacgatcatccagggggatgcatgtttcaaccaagcttc
agcggcggcgcaagtcgcgttcttttatcgtcactgatgtcgccgtggcggcatatgcac
atcgcggcgcgatctgtgcgatcaggcctcgttgcgatggtggcgacgctcatgctgatg
acgctggcgggctggtttaaccctgtctctgcgcagggcgtttctgcgtgcggaacgatc
accgggacggtcgcttcgggccagcagattcagcttcatttcgacacctgctctcagacc
ggatggaacggtattctgacgaatcccacgaacggcagcatcgtcgcggcaaatccgacg
gcaggcgacaccaacacgtacatcacctattccaacaacggcaacggccagctctcggat
accttcaccgccaaggatgaaagcaacaacaccatcaccttcaacatcaccatcagcgcg
ccgacttcgccgctgacggtgtctccggcggcgtccgccaacccgaccgtcggccagagt
ttcacgcagcagatgagtactaccggcggcacttcgccctatacatacgcgctggttgca
ggctcgctgccaccgggcatcaccttcaatggttcaaccggtgcctttggcggttcggcg
accgcctccggcggctataacttttcgatcaaggtcaccgactcggcggcgacacccaat
acgttcaccaagccctatcagatgaacgtcggcgcggcgacgctgagcatctcgccgggg
acgctgccgaatggcactgcgaccgtcgcctactcccagcaaatgagcgccagcggcggt
attgcgccatatagttatgcgatggacaccactaactttccgggaggcggcacgccattg
agcatcagctccaccggtctgatttccggcacgccaaccacggccggcaccgctaccttc
cggatcgtggtcactgacagcacttccggcacacccgcaatcgcgacggccaactacagc
atgacgatcgatcccctgccgccgccggtggccggcccggtcagtctgcccgtcgcttac
aacagcagcctcaacccggtaacgctgtcactcagcggcggtgctgcatcctcggttgct
atcggcactgcgcccttgcatggctccacaagcgtcagcggcacgacgatcaagtacaca
ccgaccaccggctacaacggcccggattcatttacttatacggcgaccaatgtcggcggc
acttccagtccggcaaccgtgagcgtgacgatgacggcaccgacgatcacggtgtcgcca
agcggcaccgcactcagtgcgacgacgatatcggcattcagccagtcgttcagcgccagc
ggcggcagcggcccttatacctacagccagaccggcaccttgcccaccggcctgagcttc
aatgccggcacggcgacgctgtcgggaacgccgacccaggcaggaaccttttctttcacg
atcactgcgaccgacagttccaccggcaccgcggccaccggttcgcgcaactacacgctg
aatgtgacggcgccgacgattaccgtgtcgataggtgcgtccacgctgcaacgtggtgtc
cccgttacccagcaggcgactgccagcggcggcaacggcacctacacgtatgcggtcacc
ggcggcgcgttaccggccggtctgaacctgaaccccgccacgggcgcgattaccggtacg
ccttccgctgccggcgcgtattccttcacgctcaccgccaccgacggcaatggcttcacc
ggcgcgcaaggattcgtcggcaccgtcggtgcaggcgcaccgatcgtttcttccagcagc
gcgacggtcgcctacaatgccggcggcagcagttacacgattcccatttccgcaacaggc
ggcacgccgtcttcgctgacggtaaccggcgcggcggcacatggcacggtcagcccgctg
agcgtttcagcgttcagctatacgccgaccaccggttatgccggcgccgattcgttcacc
tataccgcgaccaacgcggtagggacatcaggaacggcgaccgtgacgatcacggtaagt
ccgcccacactgacgctgtcacccgcttccgtggcgctgaccgccgcggtcggtacgccg
tattcgcaaacattctccgccagcggcggcgtgccggcttatgtctatgcccagaccggc
tccttgcccaccggcgtgaccttcaacgccggcaccggcgtcctgtccggcacgccggcg
caggccggcactttcaacttcaccatcagcgtgctcaacgatggctccaccggcacgggt
attccctttaccacttcgcgcacctatacgttgacgatcggcgcaccgacgctgggcatc
tcgccgtcttcgctgacccagcctcaggtgggcatcagcttctctcagcagttgtcgact
tccggcggcaccgcgccttacacctacaccgtaacggcaggcgcgacaccgggtggattg
aacgtaacgtccggcggcctgatcagcggtacgccgacgactgccggggcatatagcttc
tcggtaacgtccaccgacagcttcggcttcaatacgacggtcagttacaccggcaccgtc
ggcgccggcaagcctgtgacggccaacagcagtgccacggtcagctacagcagcagcaac
aacgctattccggtatcgatcaccggcggcacgccgacctcgctaaccattaccacggcg
gcggcacacggctcggcgacaccctccggcatcacgggattcacttacacgccgacggcc
ggctacagcggcacggataccttcagctatagcgccaccaatgcgatcggcacctcgacg
gtggcaacagtgaccgtgacgatcggcgcgccgacggtggtgattacaccatcggcggcg
tgggtcgcgacacagggaaccagttatactcagacgctgacctggagcggcggcaccgcg
ccctacagcaccatcacggtgacgggcttgccgacaggcctgacctacagcaccagcact
accgacgcgaccatttccggcacgccgacgcaaaacggcagtttctcgttgaccgcttcg
gccatcgacagcagcacgccgacgccggtgaccaagtcgcagaatttcacgctgacggtc
ggccaggcagtaccggtcgccgtggccgatagcgccaccacgaatgccaatcaggcggtg
acgattcccgtcacgaacaatgacaccagcgcgatcaccagcatcgccatcgtcaccacg
ccgctgcacggtagcgccaccgtcagcggcctcggtgttatctatacacccaacaccaat
tatttcggcagcgacagctttacttacactgccaccggtccgggcggcacctcgtccccg
gccaccgtcagcgtcacggtaacggcgctggcagtaccgacctcgccgccgcagagtgcc
agcgtgcaggcaggccagtcggtgacgctgcatgtcggcgctgccgccgccaacggtccg
atcacggcggtgacgatcgtcggtgcgcccgcttccggcagcgccgtggtcaatggcacc
gatatcgtctacaccgctatcgccggcttcaccggcaatgtgcaattcacctacacgctg
tcgaacgtgttcggcgtatctgcactcgttaccgccaccgtcagcgccagcgccgtgccg
gtcgcatcgaaccagagcgtcgccgtcgctgcgggtgtcacagccaccgtagatgtgacg
gccggcgccaccggcggtccgttcactgccgcggccatcgtcgcggtgaatcctgcaacc
gccggcaccgccaccatggtcaacgccgccagttcaggcagcccgtcctatcgcctgaac
ttcacgccggcggccgcgttctccggcgtcgccacggtcacctttacgctgagcaatgcc
tcggggccgtccgctgccgcgacggtcacgatcaccgtcggcgcccgtaccaatgccgcg
aacgatccgcaggtcaagggactggtcgccgcacacggccagaccgcaagccgtttcgcc
accgcgcagctgggcaacttcagccgccgcctggaaagcctgcacggtatgggctgggcg
ccatccagtttcggcctcggattcggccagccgacggcgccggtcaagccgctgctggca
caatggaacgaagacgaagtggatcgcgtggtcggctcgccgctgcaggccggcatgcgc
aaagtgggttggccgctgctgagtcaggcggccaaacccgagacaaagccggttgcagaa
agcagcagagaccttgccgcgctacctgaattaccatccaggcgtgaacagagccggcag
gagttgtcgctgtggatcgccggtacggtcgacttcggccagcgcaacagcaacggtcaa
caggaaggattccgcttcaccaccaacggcgtcagcatgggcgccgactatcgcctgagc
gatcaactgacgatcggcgtgggcaccggctacagccgcgaccgcagcgatatcggcgac
aacggcagcaagaccatcggacaggccgtggtcgcgaccgtctacggcagtgtgcggccg
acgccgaatattttcatcgacggcatgctcggctatggcgcgctcaatttcgattcgacg
cgttacgtcaccgacgacggcagcttcgccaccggtcagcgcggcggcaagcaactgttc
gtcgcgctgtcgagcggctatgagttccgcggcgagagctggatgtggtcaccctacggc
aaggtcgatctgacgtcgaccacgctggcgcaatataccgaagcggccgccggcaacaac
gcgctgacctatttcaaacagcgcgtgcgcaccagcagcggcaccttcggcctgcgcacc
gaaggccagtacctgagccgtttcggcatgtggacgccgcgcgcccggcttgaataccgc
cgccagttctccggcgccggcgaagctgggatttcctatgccgacctggcgtcgtcaggc
ccggcgtatgtgatccgctcggacgacagcttcaccggcaactggaccgccggcctgggc
atgcgcttgctgctgtccaacgggacatcgctgatcgtcgactacagcagcaatctgaac
gttggccagggacggtattcgtcggtgctgctggggatcaatgtgccattgcgttga
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