Halomonas elongata: HELO_2546
Help
Entry
HELO_2546 CDS
T01311
Symbol
uvrB
Name
(GenBank) UvrABC system protein UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hel
Halomonas elongata
Pathway
hel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HELO_2546 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hel03400
]
HELO_2546 (uvrB)
DNA repair and recombination proteins [BR:
hel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HELO_2546 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HELO_2546 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
Kinesin
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
CBV42430
UniProt:
E1VCS5
LinkDB
All DBs
Position
1792664..1794685
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFRLESKFKPAGDQPSAIEGLVKGLEAGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKSFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDLYLKMRLHFNRGELIDQRAFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIFPADAEDEAVRVELFDDEIDQISLFDPLTGEVRGKVPR
MTIYPKTHYVTPRETIMGAIDSIKEELAERLAWMRQHDKLVEAQRLEQRSLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPADALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMTFQEWERICPQAVFVSATPGPYEAEHAGQVVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEVRARSAVDERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAVLYGDRVTDSMRRAIDETERRRAKQIAHNEEHGITPETVSRSVADILESAE
TPGRKGKGRKSERKVAEGAAIYDPDSLSPAEIQKELTRLEDAMVEAAQNLEFEEAARLRD
RLHELKERQLAVG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgtttcgtctggaatcgaagttcaagcccgccggggatcagccctcggcc
atcgaggggctggtgaaggggctcgaagccggcctggcccaccagacgctgctgggggtg
accggctcgggcaagaccttcaccatggccaacgtcgtcgagcgcctgcagcgtccgacc
atcgtcatggcgccgaacaagaccctggccgcccagctctatggcgagttcaagtcgttc
ttccccgaaaatgccgtcgagtacttcgtttcctactacgactattatcagcccgaggcc
tatgtgccttcctcggacaccttcatcgagaaggacgcctcgatcaacgatcacatcgag
cagatgcggctgtccgccaccaaggcgctgctcgagcgtcgcgatgcgctgatcgtggtc
tcggtgtcggcgatctacggtctcggcgatccggacctctacctgaagatgcgcctgcac
ttcaatcgtggcgagctcatcgaccagcgcgccttcctgcgacgcctggccgagttgcag
tacacccgcaacgacatggacttcaagcgcgggacctaccgggtacgcggcgatgtcatc
gatatcttcccggccgacgccgaggacgaggccgtgcgcgtcgagctgttcgacgacgag
atcgaccagatcagcctgttcgatccgctgaccggcgaagtgcggggcaaggtgccgcgc
atgaccatctatcccaagacgcactatgtgacgccgcgggaaaccatcatgggcgccatc
gactcgatcaaggaagagctggcggagcggctggcctggatgcgccagcacgacaagctg
gtcgaggcgcagcggctggagcagcgttcgctctacgacatcgagatgatgctggaactc
ggctactgcaacggcatcgagaactattcccgctacctctcggggcgggcgcccggcgag
ccgccgcccacctttttcgattacctgccggcggatgccctgctgttcatcgacgagtcc
cacgtcagcgttccccaggtcgggggcatgtacaagggtgaccgttcgcgcaaggagacg
ctggtggaatacggcttccggctgccctcggcactggacaaccgccccatgacgttccag
gaatgggagcgcatctgccctcaggcggtgttcgtctcggcgacgcccggcccctatgaa
gccgagcacgccgggcaggtggtggagcaggtggtgcgtcccaccggcctgctcgatccc
gagatcgaggtgcgcccggcctccacccaggtcgacgatctgttgtcggaagtccgtgca
cgcagcgcggtggacgagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggac
ctgaccgagtacctggatgagcacgacgtcagggtgcgatacctgcactccgacatcgat
accgtcgagcgcgtggagatcatccgtgatcttcgactcggcaagttcgatgtcctggtg
ggcatcaacctgctgcgcgagggcctggacattcccgaggtttcgctggtggcgatcctc
gatgccgacaaggaaggcttcctgcgcaacgagcgctcgctgattcagaccatcggccgg
gcggcgcgcaatgcccatggcaaggcagtgctctatggcgatcgggtcaccgattccatg
cgccgtgccatcgacgagaccgaacgtcgacgcgccaagcagatcgctcataacgaggag
catggcatcacgcccgaaaccgtgtcccgttcggtggcggatatcctcgagtcggccgag
accccgggacgcaagggcaaggggcgcaagagcgaacgcaaggtggccgagggcgcggcg
atctacgatcccgattccctgtcgccggcggagatacagaaggagctgacgcggctcgag
gatgccatggtcgaggcggcgcagaatctcgagttcgaggaagccgcgcgactgcgggat
cgcctgcatgagctcaaggagcgccaactggcggtgggctga
DBGET
integrated database retrieval system
