Helicobacter pylori SouthAfrica7: HPSA_01070
Help
Entry
HPSA_01070 CDS
T01921
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hes
Helicobacter pylori SouthAfrica7
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hes03016
]
HPSA_01070
03036 Chromosome and associated proteins [BR:
hes03036
]
HPSA_01070
Transfer RNA biogenesis [BR:
hes03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPSA_01070
Prokaryotic type
HPSA_01070
Chromosome and associated proteins [BR:
hes03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPSA_01070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADU84238
UniProt:
E8QUM0
LinkDB
All DBs
Position
complement(214565..216430)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNRDPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELEKDKQEIQENLKRLKEC
VLTPSKEVLKRLNELGENPINDKMDGVSLLARDSFNLEKMRSFFSFLAPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKDFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggggggcatgcgggcattgaagcgagc
ttgattgcggctaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttagcgagctgtaatccagctattggaggcttgggtaaagggcatttgactaaagaa
gtggatgtgttagggggggctatggggattattacagatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaaggaccagcggttagggggactagagcgcaaattgatatggat
acttaccgcatttttgcaagaaatcttgttttaaacacccctaatttgagcgtctcccaa
gaaatgactgaaagtttaatccttgaaaacgatgaggtagtgggcgtaactacgaacatt
aataacacttacagagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgagcaccaaaaccaaaacgggcgctttggggaaaacgcttccaattct
ttagccttgaatttaagggagcttggctttaaggtggagaggttaaaaaccggcacttgc
ccaagagtggcgggcaatagcattgattttgaaggcttagaggagcattttggggatgca
aaccctccctatttcagctataaaaccaaagattttaaccccactcagctttcttgtttc
atcacttacactaaccccattacccaccaaatcattagggataatttccaccgagccccc
ctttttagcggccaaattgaaggcataggccctaggtattgccctagcattgaagataaa
atcaaccgctttagtgaaaaagaacgccaccagctgtttttagagcctcaaaccattcac
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagacgtgcaagaaaaa
gtcattcattctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgatttcatccagcccacagaattgacccacgctttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggctgggattaatgcggtattggccctaaagaatcgagacccctttatttta
aagcgcaatgaagcctatatcggcgttttgattgatgatttggttactaaaggcacgaat
gagccttacagaatgtttaccagccgggccgaataccgcttgcttttaagagaagacaac
acgctttttaggttaggcgagcatgcctatcgtttagggcttatggaacaggatttttat
aaggaattggaaaaagacaaacaagagatacaagaaaatctcaaacgccttaaagaatgc
gtgcttacccctagcaaagaagtattaaaacgcttgaatgaattaggtgaaaaccctatc
aatgataaaatggatggcgtcagccttttagcgcgcgatagttttaatttagaaaaaatg
cgctccttttttagctttttagcccccttgaatgagcgggttttagagcagattaaaatt
gaatgcaagtataatatttatattgaaaagcaacacgaaaatatcgctaaaatggatagc
atgctcaaggtgtctatccctaaagattttgtgtttaaaggcattccaggccttagctta
gaagcggtagaaaagttagaaaaattccgccccaaaagcctttttgaagcttcagaaatc
agcgggatcaccccagcgaatttagacgttttgcatttgtatatccatttgcggaaaaac
tcttaa
DBGET
integrated database retrieval system
