Helicobacter pylori BM012S: U064_1435
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Entry
U064_1435 CDS
T02940
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hez
Helicobacter pylori BM012S
Pathway
hez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U064_1435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hez03400
]
U064_1435
DNA repair and recombination proteins [BR:
hez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U064_1435
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U064_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_7
AAA_30
Microtub_bd
DUF87
DUF5923
UBA
Motif
Other DBs
NCBI-ProteinID:
AHA90334
UniProt:
V5NPN3
LinkDB
All DBs
Position
complement(1454186..1456162)
Genome browser
AA seq
658 aa
AA seq
DB search
MPLFDLKSPYPPAGDQPQAIETLTKSLKNNNHYQTLVGVTGSGKTYTMANIIAKTNKPAL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLER
LRLSAATSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALERNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSKKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKVRYMHS
EIDAIERNHLIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKTTQSMQKAFEITNYRRTKQEEFNKLHNITPKTVTRALEEELK
LRDDEIRIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKLRTL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgatttaaaaagcccttatccaccagcaggcgatcagccccaagccata
gaaactttaacaaaaagcttgaaaaataacaaccattatcaaactttagtgggggttaca
ggaagcggtaagacttatacgatggccaatatcatcgccaaaaccaataaacccgctttg
atcatgagccataataagaccttatgcgcacagctttatagcgagtttaaggcgtttttc
ccgcataatagggtggagtattttatctcccactttgattactaccagcctgaaagctat
atccctaggagggatttattcattgaaaaagacagctctattaatgatgatttagagcgt
ttgagattgagcgcggccacctcacttttaggctatgatgatgtgatcgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggcgagaagcgcgcttataagagctttttactcaagctagtagaaatgggttat
agccgtaatgaagtggtgtttgatagggggagctttagagcaacgggggaatgcgtggat
attttccccgcttataatgacgctgaatttattaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaagaaatgaaatcaagcgcttggattctgtc
atgctttatgcggccagtcagtttgctgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctttaaggttgaaattttttaaagagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcaaccggt
gtgtgtaagggcattgaaaattacgcgcgccattttacaggcaaagcccccaatgaaacg
cctttttgtttgtttgattatttagggatttttgagcgggagtttttagtcattgtagat
gaaagccatgtgagtttgccgcagtttggggggatgtatgcaggggatatgagcaggaaa
agcgttttagtggaatatggttttagattgcctagcgctttagacaaccgccctttaaaa
tttgatgaatttatccataaaaattgccagttcctttttgtgtccgctacgcccaataag
ctagaattagagctttccaaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagtccaggatttatttgatgaa
atcaagttagtggtggctagagatgaaagggtgctcatcaccacgctcactaaaaaaatg
gcagaagaattgtgcaaatattatgctgaatggggcttgaaggtgcgttacatgcatagt
gaaattgatgcgattgaaaggaatcaccttatccgctctttaaggcttaaagaatttgac
attttaatagggatcaatcttttaagagaagggctggatttgcctgaagtttctttagta
gcgatcatggatgcggataaagaagggtttttaaggagcgaaacaagcctcattcaaacc
atggggagagccgctagaaacgctaatggcaaggttttattatacgctaaaaaaaccact
caaagcatgcaaaaagcctttgagattacgaattacaggcgcaccaagcaagaagaattc
aataagcttcataatatcacccccaaaaccgttactcgcgctttagaagaggagttgaaa
ttaagagacgatgagattagaatcgctaaagctttaaaaaaggacaaaatccctaaaagc
gaaagggaaaaaatcattaaagaattggataaaaaaatgcgagaatgcgcgaaaaatttg
gattttgaagaagcgatgcgtttgagagacgaaatcgctaaattaagaacgctttaa
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