Helicobacter felis: HFELIS_15360
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Entry
HFELIS_15360 CDS
T01375
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hfe
Helicobacter felis
Pathway
hfe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFELIS_15360 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_15360 (uvrB)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFELIS_15360 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HFELIS_15360 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBY83620
UniProt:
E7AB08
LinkDB
All DBs
Position
1507462..1509429
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AA seq
655 aa
AA seq
DB search
MPNFQLHAPYAMSLEQEKVVQTLSEGVEQGARYQTLIGVTGSGKTFSMANLIARLQMPTL
IMSHNKTLCAQLYSEFKGFFPKNHVEYFISHFDYYQPESYIPRRDLFIEKDSSINEDLER
LRLSAVTSLLSYEDVIVVASVSANYGLGNPAEYLSMLEKIQVGQVRPYKQFLLKLVEMGY
SRQEILERGKFRVVGECVDIFPAYNDENFIRIEFFGDEIERITSMDALENTPLKQLDSYP
LYAANAFIVSPERLQQAIKDIEQELQARLSFFKQAQKPLEYERLKTRTEFDLEMISATGI
CKGIENYARHFTGKQEGETPYTLMDYFAQKQRPFLVIVDESHVSLPQFKGMYAGDLSRKQ
VLVDYGFRLPCALDNRPLQYEEFITKPPHFLFVSATPNPLELELSQGHIAQQIIRPTGLL
DPEYEVRPVANQVRDLFESIKEVVSRHERVLVTTLTKRMAEELCKHYLEWGLRVQYLHSD
IDAIERNHLIRELRLGVFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTM
GRAARHVRGKVLFYADKITASMQKAMQISDERRAKQKAFNAEHGIEPKSVQRHVEEELID
SLPAKPKRSKALEKMPKSEKDRLIKTLRAQMQQRAKVLDFEEAARLRDEIARIRL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgccaaattttcaattacacgccccctatgcgatgagtttagagcaagaaaaggtcgtg
caaactttgagtgagggggtagaacaaggggcgcgttaccagactttaattggagttacg
ggtagtggcaagacctttagcatggccaatttgatcgcgcgcttgcaaatgcccactttg
atcatgagtcataataaaaccctatgcgcccaactttacagcgagtttaaaggcttcttc
cctaaaaaccatgtggaatactttatctcccactttgattactaccagcccgagtcctac
atccccagacgcgatctcttcatagaaaaggatagctcgatcaatgaagatttagaacgc
ctgcgcttgagcgcagtaacttcattgctgagttatgaggatgtgattgtggtcgctagt
gtatcggctaattatgggctgggcaaccctgctgagtatttgagcatgctagaaaaaatc
caagtagggcaagtgcgcccctataagcaattcttgctcaagctcgtagaaatgggctat
agtcgccaagaaatcttagagcggggtaaatttagggtagtgggagaatgtgtagatatt
ttccccgcctataatgatgaaaactttattcgcatcgagttttttggcgatgagatcgag
cgcatcactagcatggacgcgctggagaacacccccctaaagcaactagactcttacccc
ctctatgcggcaaatgcctttattgtcagtccagagcgtttgcaacaagccattaaagac
attgagcaagaattacaggcacgcctaagctttttcaaacaagcccaaaagcccctagaa
tacgaacgcctcaaaacccgcaccgaatttgatttagagatgattagtgcgactggcatt
tgtaagggcattgagaattatgcgcgccacttcacgggcaaacaagagggggagaccccc
tatactttgatggactacttcgcccaaaagcaacgcccctttttggtgatagttgacgag
tcgcatgtgagtttgccccaatttaagggcatgtatgcgggggatttgagccgtaagcaa
gtcttggtagattacggctttagattgccctgtgcgctggataatcgcccgctccaatat
gaagagtttatcaccaaacccccccattttctctttgtctcagctacccctaacccccta
gagttagaactctcacaaggtcatatcgcccagcagattatccgccccaccggattacta
gaccctgagtatgaggtgcgccccgtggctaatcaagtgcgggatttatttgagagcatt
aaagaggtggtgagcagacatgagcgcgtgctggttactaccttgactaagcgcatggcg
gaggaattatgcaagcactatttagaatggggcttgagggtgcagtatctgcatagcgat
attgatgccattgagcgcaaccatttgattagagagcttagattaggggtttttgatgtg
ctcattgggatcaacttattaagagaggggctagacttgccagaagtctctttagtggcg
atcttggatgcggataaagaggggtttttacgcagtgaaaccagtttgattcagacgatg
gggcgcgcggctcggcatgtgcgtggcaaggtgcttttttatgccgataaaatcacagca
agcatgcaaaaagcgatgcaaattagcgatgagagacgggctaaacaaaaagcctttaat
gcagaacatggcattgagcctaaaagcgtgcaaagacatgttgaagaagaattgatcgat
agcctgcctgccaaacccaaacgctccaaagccctagaaaaaatgcctaagagtgaaaag
gatcgcttaatcaaaactttaagggcgcaaatgcaacaacgcgctaaggtgttggacttt
gaagaggcggcaagattgcgcgatgagatcgcacgcattaggttgtag
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