Herbaspirillum frisingense: G5S34_02425
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Entry
G5S34_02425 CDS
T06761
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr01501
beta-Lactam resistance
hfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5S34_02425
01503 Cationic antimicrobial peptide (CAMP) resistance
G5S34_02425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hfr02000
]
G5S34_02425
01504 Antimicrobial resistance genes [BR:
hfr01504
]
G5S34_02425
Transporters [BR:
hfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G5S34_02425
Antimicrobial resistance genes [BR:
hfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5S34_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QNB05745
UniProt:
A0A7G6ARW1
LinkDB
All DBs
Position
complement(522763..525918)
Genome browser
AA seq
1051 aa
AA seq
DB search
MGKFFIDRPVFAWVLAIFIMLAGALAITGLPVSQYPNIAPPTIVVTATYPGATAQTLDDS
VTSLIEQEMNGADGLQYIESQSQANGQVQITITFSPETNPDLAAVDVQNRLKRVEARLPA
AVTQQGVQVTKSRSNFLLFIGLSSTDGKLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGT
ERAMRVWIDPNKLIGLNLTPADVTAAIQAQNALVAGGTLGALPSPGTQQIAATVVVNGQL
TSPEQFGNIVLRANANGSSVRLRDVARVEVGGQSYDTSGRLDGKPSSFIGVQLSPTANAL
GTATAVHKKMDELAKYFPTGVKYTIPYDTSKFVKISIEEVVKTLIEAIVLVFLVMFLFLQ
NIRYTIIPTIVVPVALLGTFATLLLFGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM
SEEGLSPADATRKAMGQISGALIGITLVLIAVFIPMAFFGGAVGAIYRQFSLSMVASMVF
SVLMAFTLTPALCATILKPVEKGHHHEKKGFFGWFNRKFNSTAAGYQGVIARMLNKAGRY
MIVYVVIVGCVGLLYVRLPASFLPNEDQGYIITNVQLPPGASTARTTEVVKKIEEYYLKD
PAVEHAIAVLGFSFSGNGQNAALVFTPLKDWSERDKSQSADAVAGKAFGAFSQIKDAIVF
PLNPPPIPELGNATGFTFRLQDRAGMGHAALVQARNQILGMASQSKVLAGVRPEGLEDAP
QLQLDIDRDKANALGVPFSAINSVLSTALGSSYVNDFPNLGRQQRVIVQADATRRLQPED
LTNLYARNSNGGMVPFSAFVTAKWINGPVQLIRYNGYPAMKIAGGAAPGRSTGEAMAELE
SFVAKLPPGFGFEWTGQSLEEKTSGNQAPALYALSLIAVFLVLAALYESTSIPLAVMLVV
PLGILGALLGVTLRAMPNDVYFKVGMIAVVGLSAKNAILIIEFAKDLQAQGKGLIEATLE
AVHLRFRPIIMTSLAFILGVLPLAIASGAGSASQRAIGTGVMGGMITATVLAVFLVPIFF
VVVRKIFKGSDRQRKFDADHSPKINVENNNG
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagttttttattgatcgccccgtattcgcgtgggtgctagcgatcttcatcatg
ctggccggtgcgctggccatcaccggcctgccggtgtcccagtaccccaacatcgcgccg
ccgaccatcgtggtcacggcgacctatccgggtgcgactgcacagaccctggacgattcg
gtgaccagcctgatcgaacaggaaatgaacggcgccgatggcctgcaatacatcgagtcg
caaagccaggccaatggccaggtgcagatcaccatcaccttctcgccggaaaccaatccg
gacctggcggcggtggatgtgcagaaccgcctgaagcgcgtcgaggcccgtctgccggcc
gcggtgacgcaacagggcgtgcaggtgaccaagtcgcgttccaacttcctgctcttcatc
ggtctttcctcgaccgatggcaagctcgatccggtggcgctgggtgactatctgtcgcgc
aacgtcctgaacgaaatcaagcgtgtcccgggcgtgggccaggcacagttgttcggtacc
gaacgcgccatgcgcgtctggatcgatccgaacaagctgatcggcctgaacctgaccccg
gctgacgtgaccgcagccatccaggcacagaacgcgctggtggccggcggtacactgggc
gccctgcccagcccgggcacccagcagatcgccgccaccgtggtggtgaacggtcagctg
acctcgcccgagcagttcggcaacatcgtgctgcgtgccaatgccaacggttcgtcggtg
cgactgcgtgatgtcgcccgggtcgaggtcggtggccagagctatgacacttccggtcgt
ctggacggcaagccctcctccttcatcggcgtgcagctctcgcccaccgccaatgcgctg
ggcaccgctacggccgtacacaagaagatggacgagctggccaaatacttccccactggc
gtgaagtacaccatcccctacgacacctccaagttcgtcaagatctcgatcgaagaagtg
gtcaagaccctgatcgaagcgatcgtgctggtgttcctggtgatgttcctgttcctgcag
aacatccgctacaccatcatccccaccatcgtggtgccggtggcgctgttgggcaccttt
gccacgctgctgctgttcggcttctcgatcaacgtgctgaccatgttcggcatggtgctg
gccatcggtatcctggtggacgatgcgatcgtggtggtggaaaacgtcgagcgcatcatg
agcgaggaaggtctctcgccggccgacgccacccgcaaggccatgggccagatcagcggc
gcgctgatcggtatcaccctggtgctgatcgcggtgttcatcccgatggccttcttcggc
ggtgccgtgggtgcgatctatcgtcagttctcgctgtcgatggtggcttcgatggtgttc
tcggtgctgatggccttcacgctgacgccggcgctgtgcgccaccatcctcaagccggtc
gaaaagggacatcaccacgagaagaagggcttcttcggctggttcaaccgcaagttcaac
agcaccgccgccggctatcagggcgtgatcgcccgcatgctgaacaaggctggccgctac
atgatcgtctatgtcgtgatcgtgggctgcgtgggcttgctgtacgtgcgcctgcccgcg
tccttcctgcccaatgaagaccagggctacatcatcaccaacgtccagttgccgccgggc
gcaagcacggcgcgcaccaccgaggtggtcaagaagatcgaagagtattacctcaaggac
ccggcagtggaacacgccattgcggtgctgggcttctcgttctcgggtaatggtcagaat
gcggcactggtgttcaccccgttgaaggactggtccgaacgcgacaagtcccagtcggcg
gacgccgtcgcgggcaaggctttcggtgcgttctcgcagatcaaggatgcgatcgtgttc
ccgctgaacccgccaccgattccggaactgggtaacgctaccggcttcaccttccgtctg
caggatcgcgccgggatgggccacgccgcactggtacaggcccgcaaccagatcctgggc
atggcttcgcagagcaaggtgctggccggtgtgcgtccggaaggtctggaagatgcgccg
cagttgcaactggacatcgaccgcgacaaggccaacgccctgggcgtgccgttctcggcg
atcaacagcgtgctgtccacggcgctgggctcgtcctatgtgaacgacttccccaacctg
ggtcgtcaacagcgtgtgatcgtgcaggctgacgccacccgtcgtctgcaaccggaagac
ctgaccaacctgtacgcccgcaattccaatggcggcatggttccgttctccgccttcgtc
actgcgaagtggatcaatggtccggtgcagctgatccgctacaacggctacccggccatg
aagatcgccggtggcgctgctcctggccgcagtaccggcgaggcgatggcggagctggaa
tccttcgtggccaagctgccgcctggcttcggctttgaatggacgggtcagtcgctggaa
gaaaagacctccggcaaccaggctcctgccctgtatgcactgtcgctgatcgcggtgttc
ctggtgctggcagcgctgtatgaaagtacctccatcccgctggcggtgatgctggtggtg
ccgctgggtatcctgggtgcgctgctgggcgtgacgttgcgtgccatgcccaacgacgtg
tatttcaaggtgggcatgatcgcggtggtgggtctgtcggccaagaacgcgatcctgatc
atcgagttcgccaaggatctgcaggcgcagggcaaggggttgatcgaggcgacgctcgag
gcggttcacctgcgtttccgtccgatcatcatgacctcgctggccttcatcctcggcgtg
ctgccgctggcgattgcctctggtgccggctctgccagccagcgcgccatcggcaccggc
gtgatgggtggcatgatcacggcgaccgtactggcggtgttcctggtgccgatcttcttc
gtggtcgtgcgcaagatattcaagggtagcgatcgtcagcgcaagttcgacgccgaccat
tcgcccaagatcaatgtggagaacaacaatggctaa
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