Herbaspirillum frisingense: G5S34_23300
Help
Entry
G5S34_23300 CDS
T06761
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hfr
Herbaspirillum frisingense
Pathway
hfr00521
Streptomycin biosynthesis
hfr00523
Polyketide sugar unit biosynthesis
hfr00541
O-Antigen nucleotide sugar biosynthesis
hfr01100
Metabolic pathways
hfr01110
Biosynthesis of secondary metabolites
hfr01250
Biosynthesis of nucleotide sugars
Module
hfr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
G5S34_23300 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5S34_23300 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5S34_23300 (rfbC)
Enzymes [BR:
hfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
G5S34_23300 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Mac-1
Motif
Other DBs
NCBI-ProteinID:
QNB09401
UniProt:
A0A7G6B2B7
LinkDB
All DBs
Position
5132031..5132576
Genome browser
AA seq
181 aa
AA seq
DB search
MLVTPTPLAGLMLIQPQVFSDSRGFFYESFNERDFRARTGADVRFVQDNHSLSVRGVVRG
LHYQLPQAQGKLVRVTRGAVLDVVLDIRRSSPTFGQWFSQVLSASNQLQLWLPAGFAHGF
SVLEDETECLYKTTDYWMPEQEHTILWNDPALAIDWQLQGEAILSDKDRNGIPLAQAAVF
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcacccccactcccctagcgggcctgatgctgatccaaccccaggtcttcagc
gacagtcgcggcttcttctacgaaagcttcaacgagcgcgacttccgcgcacggaccggg
gccgatgtccgtttcgtacaggataaccactctctctccgtgcgcggtgtcgtgcgcggt
ctgcattaccagctcccgcaggcacagggcaagctggtacgggtcacccggggtgcagtg
ctggatgtggtgcttgatatccgtcgcagttcgcctactttcggtcagtggttcagccag
gtcctgagcgcgagcaaccagctgcaactttggttgccggcgggattcgcgcatggattc
tcggtcctggaagatgagaccgaatgcctttacaagaccaccgattactggatgccggaa
caggaacacaccattctctggaatgacccggcgctggctatcgattggcaactgcaaggg
gaagctatcctgtccgacaaggatagaaacgggattccgctggcgcaggctgcggtgttc
gaatga
DBGET
integrated database retrieval system
