Candidatus Hydrogenisulfobacillus filiaventi: R50_1027
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Entry
R50_1027 CDS
T08923
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hfv
Candidatus Hydrogenisulfobacillus filiaventi
Pathway
hfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R50_1027 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfv03400
]
R50_1027 (priA)
Enzymes [BR:
hfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50_1027 (priA)
DNA repair and recombination proteins [BR:
hfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R50_1027 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
HTH_IclR
AAA_30
HTH_23
HTH_Tnp_1
zf-ISL3
DUF6078
HTH_3
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
CAB1128533
UniProt:
A0A6F8ZFX0
LinkDB
All DBs
Position
1:978115..980241
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AA seq
708 aa
AA seq
DB search
MAVVEVVVERAVEALDRTLSYEAGNLTVEPGMRVLVPLGRQRATGIVVARDTAAPPRPLK
AVLAVLDDRPLLTPALLDLARWMTGRYRCYWPQALAAMVPGAVRRGVRPAPEDPPLLAAG
AEPRGPVRARIWTLARETPGLTLSELARRAGVQPAVVRRLWKAGGLAEADAPAPDPPPLL
TPAQEAALEAARAAGRRPLLLEGVTGSGKTEVYFALMADALAAGRQALLLVPEIALTPQT
VERVRSRFGPRVGIWHSALSDGERVRTWNGVRDGSIPVVVGARSAVFLPFARLGIIVLDE
EHESTYKQDDHPRYHTREVAEQRAGLEGARLVLGSATPSVETAWRARQGAMVRARLPARY
HGRPLPPVTVVDMRAELAAGNRSMFSRYLLDGISRRLEQGEQVVLFLNRRGFASFYLCRD
CGRAVTCPHCAVTLTYHASPSALRCHYCFHSEPVPAVCPHCGSRRIRHFGVGTEQVEEAV
ARLWPQARVLRADRDTVGTRSQYEALYYRFLHGEADILVGTQMIAKGMDWPGVTLVGAVA
ADVGLNLPDFRAAERSFQLLVQAAGRAGRGDRPGEVVIQTYNPGHYAIEAAARYDYEGFL
EQEIGFRRELGYPPFGCLWLVELRGPDAAAVAGAAQRLAEALRAQAPGVTVRGPAPAPIP
RLRGAWRQHLLLAAPDPGRLEAAGVILAAQVPNPPVEMAVTVDPYHML
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcgaggtggtggtggagcgtgcggtcgaggccctggaccgcacgcttagt
tatgaagcgggcaacctgacggtggagccgggcatgcgggtcctcgtgcccctgggccgg
cagcgggccaccggtatcgtggtggcccgggacacggcggcgccgccacggccgctgaag
gcggtgctggccgtgctggacgaccggccgctgctgaccccggccctgctggacctggcc
cgctggatgaccggccgttaccgttgctattggccgcaggccctggccgccatggtgccg
ggggccgtgcggcggggggtgcggccggcgcccgaggatccgcctctgctggcggcggga
gcggagccgcggggcccggtccgcgcccgcatctggaccctggcccgggagacccccggc
ctgaccctcagcgaactggcccggcgggcgggggtccagccggccgtggtgcgccggctg
tggaaggccggcggattggcggaggcggatgccccggccccggatccgccgccgctcctc
acccctgcccaggaggcggcgctggaagcggcccgggcggccggccgccggcccctgctg
ctggaaggagttaccgggtcgggcaagaccgaggtctacttcgcgctgatggccgatgcc
ctggccgcgggccgccaggccctgctgctggtgccggagattgcgcttaccccgcagacg
gtggaacgggtacggagccgcttcggaccgcgggtggggatctggcattccgccttgagc
gacggggagcgggtgcgcacctggaacggggtgcgggacgggagcatcccggtggtggtg
ggcgcccgctcggctgtcttcctgcccttcgcgcggctggggatcatcgtgctggatgag
gagcacgagagcacctacaagcaggacgaccatccccggtatcatacccgggaggtggcc
gagcagcgggccgggttggaaggagcccggctggtgctgggcagtgccaccccttcggtg
gagaccgcctggcgggcccgccagggggctatggtccgggcacggctgccggcgcgctat
cacggccggccgctgcctccggtcactgtggtcgacatgcgggctgagctggccgcgggc
aaccgctccatgttctcccgctatctgctggacgggatcagccgtcggctggagcagggg
gagcaggtggtcctcttcctgaaccgtcgcgggttcgcctccttctatctctgccgggac
tgcggccgggcggtaacctgccctcactgcgccgtcactctcacctatcacgccagtccg
tccgccctgcgctgccattactgctttcacagcgagccggtgccggcggtgtgcccccac
tgcgggagccggcgcatccggcatttcggggtggggacggaacaggtggaggaagcggtc
gcccgtctgtggcctcaggcgcgggtgttgcgtgccgaccgggatacggtggggacccgc
tcccagtacgaggcgttgtattaccgcttcctgcacggggaggccgacatcctggtgggg
acccagatgatcgccaaggggatggactggccgggggtgaccctggtgggggcggtggca
gcggatgtgggtctgaacctgccggatttccgggcggccgagcgctcctttcagctgctg
gttcaggcggccgggcgggccggccggggggaccggccgggcgaggtggtgatccagacc
tataatcccggccattatgccattgaggcggccgcccgttacgactatgaggggtttctg
gagcaggaaatcggcttccgccgggaattgggctatcccccgttcggctgtctctggctg
gtggagctgcgggggccggacgcggcggcggtggccggcgcggcccagcggctggcggag
gcgctgcgggcccaggcacccggcgtcaccgtgcgcggaccggctccggcccccattccc
cgtctgcgcggggcgtggcggcagcacctgctgctggcggcgccggacccgggccggctg
gaggcggccggggtcatcctggctgcccaggttccgaacccgccggtggagatggcggtg
accgtggatccgtatcacatgttgtga
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integrated database retrieval system
