Haloferax gibbonsii: ABY42_06030
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Entry
ABY42_06030 CDS
T04025
Name
(GenBank) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgi03400
]
ABY42_06030
Enzymes [BR:
hgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
ABY42_06030
DNA repair and recombination proteins [BR:
hgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
ABY42_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKU07319
UniProt:
A0A0K1ISB5
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All DBs
Position
complement(1138921..1140417)
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AA seq
498 aa
AA seq
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MTVWVLGDQLDPSAAPPQSDDRVLMIEAHAFGDRLPYHPQKLALVFSAMRHFRDDLRERG
YEVTYVEAETFGEGLDRYFDAAPGDDLVMLDPPSHGAGERLRELVAARGGSLTLVENDLF
LTTPTDFDDWAGDADTYRQEHWYRHARRETGVLMDGDDPVGGEWNYDDRNRETPPEGWTP
PEAPRFEPDETTREVIGFVRERYPDAWGSPEPFVWPVTREEAKQALSHFVEVRLPEFGPY
QDAMVDGEWALCHSLLSAAINLGLLHPREAVEAVEEAYEAGDAPLNSAEGFVRQVLGWRE
FVRHVYRRSMPELAAANQLDQTESLPEAYWTGETDMRCLSEAVGHVRDRGYAHHIERLMV
LSNFALVYGVDPAELDRWFHLGFVDAYHWVTTPNVVAMGSFGTDVLSSKPYASSGNYVNE
MSDYCSSCPYAVSKTTGENACPFNALYWDFLKENEERLRGTGRMGLMYSHVDRKDDEEWD
AIRARADEIRRMGRAGTL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctgggtcctcggcgaccaactcgacccgtcggccgcgccgccgcagtccgac
gaccgcgtgctgatgatagaggcccacgccttcggcgaccgactgccgtaccatccccag
aagctcgcgctcgtcttctcggcgatgcggcacttccgcgacgacctccgcgagcgcggg
tacgaggtgacctacgtcgaagccgagacgttcggcgaggggctcgaccgctacttcgac
gccgcccccggcgacgacctcgtcatgctggacccgcccagtcacggcgcgggcgagcgg
cttcgggaactcgtcgccgcccgcggcgggtcgctcacgctcgtcgagaacgacctgttt
ctcacgacgcccacggacttcgacgactgggccggcgacgccgacacctaccgacaggaa
cactggtaccgacacgcccgccgggagacgggcgtcctgatggacggcgacgaccccgtc
ggcggcgagtggaactacgacgaccggaaccgagagacgccgccggaggggtggacgccg
cccgaggccccgcggttcgaaccggacgagacgacgcgcgaggtcatcgggttcgtccgc
gagcgctaccccgacgcgtgggggtcgccagaaccgttcgtctggccggtaacgcgcgag
gaggcgaagcaggcgctgtcgcacttcgtcgaggtccgccttcccgagttcggcccgtat
caggacgcgatggtcgacggcgagtgggcgctctgtcactccctgctgtcggcggccatc
aacctcggcctgctccacccgcgcgaggcggtcgaagcggtcgaggaagcttacgaggcg
ggcgacgccccgctcaacagcgccgaggggttcgtccggcaggtcctcggctggcgggag
ttcgtgcggcacgtctaccggcggtcgatgcccgaactggccgcggcgaaccaactcgac
cagaccgaatcgctcccggaggcgtactggaccggcgagacggacatgcgctgtctctcg
gaggccgtgggtcacgtccgcgaccgcggctacgcccaccacatcgagcgcctgatggtg
ctttcgaacttcgcgctcgtctacggggtcgacccggcggaactcgaccgctggttccac
ctcggcttcgtcgacgcgtaccactgggtgacgacgccgaacgtggtcgccatgggctcg
ttcggcaccgacgtgctctcgtcgaagccctacgcctcgtcggggaactacgtcaacgag
atgtccgactactgctcgtcgtgtccctacgcggtgtcgaagacgaccggcgagaacgcc
tgcccgttcaacgcgctctactgggacttcctgaaggagaacgaagagcgcctccggggg
acgggtcggatgggactcatgtactcccacgtcgaccggaaggacgacgaggagtgggac
gccatccgggcgcgggccgacgagattcggcggatgggccgagcgggaacgctctga
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