Heterocephalus glaber (naked mole-rat): 101698439
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Entry
101698439 CDS
T02812
Symbol
Ddx55
Name
(RefSeq) DEAD-box helicase 55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hgl03009
]
101698439 (Ddx55)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101698439 (Ddx55)
Ribosome biogenesis [BR:
hgl03009
]
Eukaryotic type
Pre-60S particles
Helicases
101698439 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
101698439
NCBI-ProteinID:
XP_004844013
UniProt:
G5AWT6
LinkDB
All DBs
Position
Un
AA seq
600 aa
AA seq
DB search
MELVTEGSWESLPVPLHPQVLGALRELGFRYTTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGG
RNPGEDVERFKRQGGNIIVATPGRLEDMFRREAEGLALASCVRTLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLHNYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIH
GKMKYKRNKIFMDFRTLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RFGHGGSALVFLLPMEEAYVSFLDINQKCPLQETRRQGNVANLLPKLQAMALADRAVFEK
GMRAFVSHVQAYAKHECNLIFRLKDLDFASLARGFALLRMPRMPELKGKQFPDFVPVDVN
TDTIPFKDKVREKQRQKLLEQQRKEKTENEGRRKFIKNKAWSKQKAKKERKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLKKLKKGKITEDEFEKGLLTSGKRVARTADPGLREPEDGC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgtgaccgagggttcctgggagtcactgccggtgccgctgcacccgcaggtg
ctgggtgccctgcgggagctggggttccggtatacgacgccggtgcagtctgcaaccatc
ccgctgttcatgaagaacaaagatgtcgctgcggaagcggtcacaggtagtggcaaaacc
ctcgcctttgtgatccccatcctggaaatccttctgagaagggaagagaagctaaagaag
agtcaggtgggtgccataatcatcacccccactcgagagctggccattcagatcgatgag
gtcctgtcgcatttcacgaagcccttcccgcagttcagccagatcctttggatcggaggc
aggaaccctggagaagatgtggagaggttcaagcgacaaggagggaacatcatagtggcc
accccaggccgcctggaggacatgttccgaagggaggcggagggcttggccctggccagc
tgtgtgcggaccctggacgtcctggtgctggacgaggcagacagacttctggacatggga
tttgaggccagcatcaacaccatcctggagtttctgccgaagcagaggagaacgggcctt
ttctcggccacacagacgcaggaggtggagaacctggtgcgcgccgggctccgaaacccg
gtgcgtatctcggtgaaggagaagggcgtggcagccagcagcacccagaagacaccctcg
aggcttcacaactactacatggtatgtaaggcagatgagaagttcaatcagctggtacat
tttcttcggaatcacaagcaggagaaacacctggtctttttcagcacttgtgcctgtgtg
gaatactacgggaaggccctggagaccctggtgaagggagtgaagatcatgtgcattcac
gggaagatgaagtacaagcgcaacaagatcttcatggacttccgcaccctgcagagtggg
atcttggtgtgcacagacgtgatggcccggggcatcgacattcccgaagtgaactgggtt
ctgcagtacgaccctcccagcagcgcgagtgccttcgtacatcgctgtggccgcacggcc
cgctttggccatggtggcagtgccctggtgttcctgctgcccatggaggaggcctacgtc
agctttctggacatcaaccaaaagtgcccgctgcaggagacacggcgccaggggaacgtg
gcaaaccttctgccgaagctccaggccatggccctggccgacagagccgtgtttgagaag
ggcatgagggccttcgtgtcccacgtccaggcctacgccaagcacgagtgcaacctcatc
ttcaggctgaaggatcttgattttgccagtcttgctcgaggttttgccctgctgcggatg
cctaggatgccagagctgaaaggcaagcagtttccagattttgtacctgtagatgttaac
acagacacgattccatttaaagacaaagtcagggagaagcagaggcagaaactactggag
cagcaaagaaaagagaagacggaaaatgaagggagaaggaaattcataaaaaataaagcc
tggtcaaagcagaaagccaaaaaggaaaggaagaagaaaatgaatgagaaaaggaaaagg
gaagagggatccgacatcgaagacgaggacatggaggaacttcttaatgacacaagactc
ttgaaaaagcttaaaaaaggcaaaattacggaagatgaatttgagaaggggttgctgaca
agcggcaaaagagtagccaggacagcagacccagggctcagggagccagaggatggctgc
tga
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