Heterocephalus glaber (naked mole-rat): 101705854
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Entry
101705854 CDS
T02812
Symbol
Col18a1
Name
(RefSeq) collagen type XVIII alpha 1 chain
KO
K06823
collagen type XVIII alpha
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101705854 (Col18a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hgl04147
]
101705854 (Col18a1)
00535 Proteoglycans [BR:
hgl00535
]
101705854 (Col18a1)
00536 Glycosaminoglycan binding proteins [BR:
hgl00536
]
101705854 (Col18a1)
Exosome [BR:
hgl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101705854 (Col18a1)
Proteoglycans [BR:
hgl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101705854 (Col18a1)
Glycosaminoglycan binding proteins [BR:
hgl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101705854 (Col18a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
101705854
NCBI-ProteinID:
XP_012926840
LinkDB
All DBs
Position
Un
AA seq
1499 aa
AA seq
DB search
MAPDPSRGLRLLLLVACCLAPAQATLLPLDWLWSSKISGSTASPVSQPQGRPSPEPTAAP
STHVAPQHGPLEPRTVPASTRPASEGQAAAWSEAPAAQAASTASLDPKEENVGGVGARIL
NVAQGIRSFVQLWDDAAPTGTSAAVGTPGPAPPVDPSALAGPSGDPQDSSAASWPSPGAP
SLLGPRTAKAGALAVPAWPPLSPAPLRGPPVPPASPESAHQEVGLLQLLGEPLPQQVRAI
DDPEVGPAYVFGLDANSGQVAQYHLPSPFFPDFSLLFHVRPDTEDAGMLFAITDAAQAAV
VLGVKLSGVQDQHQNISLLYSEPGTSQTHTAASFRLPAFVGQWTRFALSVDAGSVALYVD
CEEFQRLPFAQSLGRLELEPGAGLFVGQAGGADPDKFQGAIAELWVRGDPRVSPVHCLDE
EDEDKEGASGDFGSGLEETGELHRETGAMTQTLGLPLPPPVTPPPLARGGSVEDARMEEM
EEPSTAASPRHEAVPAKTLPGPGSNDAWDESAWSPGSSQGKGGLKGQKGEPGVQGPPGPV
GPQGPGGSMMHGPGAQGPPGPPGNDGAPGRDGEPGDPGEDGRPGDAGPQGFPGPPGDVGP
KGEKGDLGVGPRGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFSGDLETLRGPRGFPGPP
GPPGVPGLPGEPGRFGVNSSHVLGPPGLPGVPGRDGSPGFPGSPGPPGPPGKEGPPGRVG
QKGSPGDVGAPGPKGSQGDPGPEGSPGETGFAGAPGPAGPPGPPGPPGPPGPRLAAGFDD
MEGSGAPFWSTAGGSAGLQGPPGLPGLKGDPGLPGDKGEVGADGARGFPGLPGSEGPTGP
MGPKGEKGSRGERGDPGKDGVGQPGLPGPPGPPGAVVYVSEPGRALASAPGPEGRPGFAG
FPGPAGPKGDEGSKGAPGSPGPKGERGEPGAIFSPDGRALGPAHKGAKGEPGFRGPPGPY
GRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGSGVRGMPGPPGPPGPPGPPGTPVY
DSNAFVESGRAGPPGPRGLPGPSGPKGDKGEVGPPGPPGQFPLDLLRLGAEMKGEKGDRG
DAGQKGQMGTPGASGGIFGSSVPGPPGYPGPPGIPGPKGDSIQGPPGPPGPQGPPGIGYE
GRQGPPGPPGPPGPPSFPGPHRQTVSVPGPPGPPGPPGPPGTMGTSSGVRAWASYEAMLE
KVHEVPEGWLLFVAEDEALYVRVRNGVRKVLLEARMPLPSATDNEVAALQPPLVQLHGGG
PYPRREHSYSTARPWRADDILASPPRLPAPQPYPGAPHRHGAYMHLRPASPTSLPTHTHH
DFQPVLHLVALNSPLPGDMHGIRGADFQCFQQARAVGLRGTFRAFLSSRLQDLYSIVRRA
DRGAVPIVNLKDEVLSPSWEALFSGSRGQLKPGARIFSFDSRDVLRHPAWPQKSVWHGSD
PSGRRLTESYCETWRTEEAAATGQASSLLAGRLLEQSPSSCRNAHIVLCIENSFMTPSK
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcagaggcctccgcctactgctgctggtcgcctgctgcctggcg
cccgcccaggccaccctgctccccctggactggctgtggtcttcgaagatcagcggctcc
acagccagcccggtctcccagccccagggccgcccgtccccggagcccacagcggccccc
tccacgcatgtggccccccagcatggccccctggagccaaggaccgtccctgccagcacc
cggccggcctcagagggacaggcggccgcctggagcgaggcccctgctgcccaggctgcc
tccaccgcgagcctggaccccaaggaggagaacgtcgggggcgtgggcgccaggatcctg
aacgtggcccagggcattcggagcttcgtccagctgtgggacgatgctgccccaaccggg
acctccgctgccgtggggacgcctggccccgcgccccccgtggacccgagcgccctcgct
ggcccctctggcgacccccaggacagcagcgctgcttcgtggcctagtcctggagcccca
agccttctgggccctcggacagccaaggccggtgccctggctgtgcccgcctggccacct
ctgtccccagcaccgctgaggggaccccccgtgccacctgcgtccccagagagtgcccac
caggaggtggggctgcttcagctcctcggggagcccctgccccagcaggtcagggccatc
gatgaccctgaggtcgggccggcctatgtcttcggactggacgccaacagcgggcaggtg
gcccagtaccacttgcccagccccttcttccctgatttctcgctgctgttccacgtgcgg
ccagacacggaggatgcaggcatgctgtttgccatcacggacgctgcacaggcggccgtg
gtgctgggtgtgaagctgtcaggagtgcaggaccagcaccagaacatctcgctgctctac
tcagagccgggcacgagccagacccacacggctgccagcttccgcctgcctgccttcgtg
ggccagtggacccgctttgcactcagcgtggatgctggctccgtggcgctgtacgtggac
tgtgaggagttccagaggctgccattcgcgcagtccctggggcgcctggagctggagcct
ggtgccggcctcttcgtgggccaggccggaggagcagaccccgacaagtttcagggggcg
atcgcggagctgtgggtgcgtggggacccccgcgtgagccccgtgcactgcttggacgag
gaggacgaggacaaggagggggcatctggagacttcggcagtggcctggaggagaccgga
gagcttcaccgggagaccggggccatgacccagacgctcggtctccccctgcctccgccc
gtgactcctcctcccctggccagagggggcagcgtggaagatgccaggatggaggagatg
gaggagccaagcacggcagcttcaccacggcatgaggctgttccagctaagacccttcct
ggcccaggttcgaatgacgcgtgggacgagagtgcctggagcccggggagcagccagggg
aagggaggcctgaaggggcagaagggggagccgggagttcaggggccacctggcccggtt
gggccccagggccctggaggctccatgatgcacggccctggggcccagggtccccctggg
cccccagggaatgacggtgccccaggcagggacggtgagccgggggaccctggcgaggac
ggaagaccaggggacgctgggccacagggcttcccggggcccccgggggacgtgggcccc
aagggagagaagggagacctgggggtcgggccgagaggacccccagggccccaagggccg
ccggggccgccaggaccgtccttcaggcacgacaagctgaccttcatcgacatggagggc
tctggcttcagtggcgacctggagaccctcaggggcccacgaggcttccctggcccccct
gggccccctggagtcccaggcttgcccggagagcccggccgcttcggggtgaacagctcc
cacgttttgggacccccaggcctccccggtgtgcctgggcgggacgggtcccctggcttt
cccggctccccgggacccccaggacccccagggaaggagggtcctccaggaagagtgggc
cagaaaggcagccctggagacgtgggcgcccccggacccaagggcagccaaggagaccca
ggccccgaaggttctccaggggagaccggctttgcgggagcccctggccctgccggaccc
ccaggacccccaggacctcctgggccacccggaccaagactcgccgcgggatttgatgac
atggaaggctccggggcccccttctggtccacagccggaggctccgcagggctgcaggga
ccgcccggcctgccaggactgaagggggatcccggcctgcccggagacaagggagaagtc
ggagcagatggagctcgagggttccccgggctcccaggcagcgagggtcccactgggccc
atgggaccaaaaggcgagaaaggcagccggggagaaagaggcgacccagggaaggacggt
gtggggcagcccggcctgcccgggcccccagggcccccgggagctgtggtctatgtgtcg
gagccgggtcgagccctggccagcgcgccgggccctgagggcaggccgggcttcgcgggc
ttccccggacccgccgggccgaagggcgacgagggctccaaaggtgcaccaggctccccg
ggacccaagggtgagagaggagagccgggcgccatcttcagccccgatggcagagccctg
ggccctgcgcacaagggagccaagggagagccgggcttccgcggacccccaggcccgtac
gggcggcctgggcacaagggagagatcggctttcctggacggccgggtcgccccgggatg
aacgggctgaagggtgagaagggtgagcccggagatgccagcctcggatccggcgtgagg
ggaatgcctggcccccctggacctccgggcccccccgggccccctgggacgcccgtctat
gacagcaatgcatttgtggagtccggccgtgctggacctccaggaccacgagggctgcca
gggccttctggaccaaagggcgacaaaggagaggtgggcccgcccggaccgccagggcag
ttccccctggacctcctccgcctgggagctgagatgaagggagagaaaggggaccgtggg
gacgccggacagaagggccagatgggcacgcccggggccagtggcggcatcttcggctcc
agtgtccccggcccccccgggtaccccgggccccccggcatcccgggtcccaagggagac
agcatccagggcccgcctggcccgcctggccctcagggacctccgggcattggctatgag
gggcgccagggcccccccggcccccccgggccccccgggcccccctcatttcccggcccg
cacaggcagactgtcagcgttcccggcccccctggccccccagggcccccagggccccca
gggaccatgggcacctcctcaggggtgagggcctgggcctcctacgaggccatgctggag
aaggtgcacgaggtgccggagggctggctcctcttcgtggccgaggatgaggcgctctac
gtccgtgtccgaaatggggtccgcaaggttctgctggaggctcggatgccactgcctagt
gctacggacaatgaggtggccgccctgcagcccccgctggtgcagctgcacgggggcggc
ccgtacccgcggcgggagcactcctactccactgcgcggccctggcgggcggatgacatc
ctggccagccccccgcgcctgccagccccccagccctaccccggagccccacaccgccac
ggtgcctacatgcatctccggcctgccagtccgacgagcttgcccacccacacccaccac
gacttccagccagtgctccacctggtggcactcaacagcccgctgccgggtgacatgcat
ggcatccgaggggctgacttccagtgcttccagcaggctcgggccgtggggctgaggggc
accttccgtgccttcctgtcctcgcggctgcaggacctctacagcatcgtacgccgtgca
gaccgcggggctgtgcccattgtcaacctcaaggacgaggtgctgtctcccagctgggag
gccctgttctcggggtcccggggccagctgaagcctggggcccgcatcttctctttcgac
agcagggacgtcctgaggcacccagcctggccccagaagagtgtgtggcatggctccgac
cccagcgggcgccggctgaccgagagctactgtgagacgtggcggacggaggaggcggca
gccacaggccaggcctcgtcactgctggccggcaggctgctggagcagagcccctcgagt
tgccgcaacgcccacatagtcctctgcatcgagaacagtttcatgacgccctccaagtag
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integrated database retrieval system
