Heterocephalus glaber (naked mole-rat): 101719619
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Entry
101719619 CDS
T02812
Symbol
Thoc1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101719619 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
101719619 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101719619 (Thoc1)
03041 Spliceosome [BR:
hgl03041
]
101719619 (Thoc1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101719619 (Thoc1)
Spliceosome [BR:
hgl03041
]
Complex C
Other components
EJC/TREX
101719619 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101719619 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
101719619
NCBI-ProteinID:
XP_012930692
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MSATPLLFSLPEARTRFAKSAREALNNKTIKPLSNTFNQLPGSENEKKCTLDQAFRGILE
EEIINHSSCENVLAIISLAIGGVTGGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPENMV
ESEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDTLLKENESPDVRRDKPVTGEQLELFANKLGEQWKILAPHLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGIHATPDNLISALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgacaccgctgctcttcagtttgcccgaagcgcgaacgcggtttgcgaagtct
gctagagaggccttgaataacaaaactatcaagccattgtcaaataccttcaaccagtta
cctggcagtgaaaatgaaaaaaaatgtaccctggaccaggctttcagaggtattctagaa
gaagagattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactggaggtatttgtactgcatctacgccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattttattctgctgggaaaaattatttactacgtatgtgc
aatgatctcctaagaagattatctaaatcccagaacacagtcttctgtggacgaattcaa
ctctttttggccaggctttttcctctgtctgagaaatccggtctgaacttacaaagccag
tttaatctcgaaaatgtcactgttttcaataccaatgagcaagaaagcaccttgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagcgccaacaacttgctccattccaatcgattacaacttgtacagaaaattctggtcg
cttcaggattacttcaggaacccagtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgtttttaagagttataaattagatgacactcag
gcctccaggaaaaagatggaagaattgaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgatagtaacttccgtcgacac
atcctgctgcagtatctcattttattccagtatctcaaggggcaggtcaagttcaaaagt
tcaaactatgttttaactgatgaacaatcactctggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacacggaagaaaattggaactcatggaaaaatgaaggttgcccaagttttgtg
aaagaaagaacatcagattccaagcccacgagagtggtacggaaaagaacagccccagag
gacttccttgggaaaggacccaataagaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctgtgtcctgataatatggaagcctgtaaatcagacacaagggagtacatg
ccaactttggaggaattctttgaagaagccattgaacaagcagatcctgaaaacatggtt
gaaagtgaatataaagttgtgaacaattcaaattatggctggagagccctgagactgttg
gcaaggagaagcccacatttcttccagccgactaaccagcagtttaaaagcttgccagag
tatctcgaaaacatggtaataaagttagccaaggaactaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatactttactgaaggaaaatgaaagc
cctgatgttcggcgggataaacccgtgacaggggaacaactagaattatttgccaacaag
ttgggtgaacagtggaagattctggctcctcacttggaaatgaaagactcagaaatccgg
cagattgaatgtgatagcgaagacatgaagatgagagcaaggcagctgctggtcgcctgg
caggatcaagagggcatccatgcgacacccgataacctgatcagcgcactgaacaagtcg
gggttgagtgaccttgcagagagtctaactaatgacaatgagaccaatagttag
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integrated database retrieval system
