Halyomorpha halys (brown marmorated stink bug): 106682789
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Entry
106682789 CDS
T07536
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hhal
Halyomorpha halys (brown marmorated stink bug)
Pathway
hhal03022
Basal transcription factors
hhal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106682789
09124 Replication and repair
03420 Nucleotide excision repair
106682789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhal03021
]
106682789
03400 DNA repair and recombination proteins [BR:
hhal03400
]
106682789
Transcription machinery [BR:
hhal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106682789
DNA repair and recombination proteins [BR:
hhal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106682789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
106682789
NCBI-ProteinID:
XP_014279328
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MVFLDSENDSSSASQSASRHSNVNSKVIDLEDSSANGVLRHKALQCANLYEYLITLPEDV
IDTLFSYPIICLAVYRDLPNIGKHYVMRVLFVEQPVPQAVIASWVGQEYSKEHTEVVEVL
SKLKVWQEASIPGGLPAWALNVTFKKNLKVAIFGGGSSWGCNPNMEADTKARDVEYLDKY
AMERWECVLHYMVGSQQQEGISADAVRILLHAGLMKRDDDDGSPVITRDGFQFLLLDTPA
QVWYFMLQYLDTVYARGMDLAQCLAFLFQLSFSILGKDYSTEGLSESLLTFLQHLREFGL
VYQRKRKGGKFYPTRLALNMTRQKGKSEISSQEGFVIVESNYRVYAYTDSNLKVALIGLF
TELLYRFPNMCVGTLTRDSVCMALRSGITSEQIIRFLTLHAHSLLIAKGGPVIPPTISDQ
IRLWEKERDRFSFTEGILYSQFLSHSDFSVLRDYASEQNCLIWHCDKRRTMVVTKQGHDD
VKKFWKKHSKGPISNC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtatttttagattctgaaaatgatagtagcagtgcttctcagagtgcctctagacac
agtaatgtgaatagtaaagtaatagacctggaggatagctcagctaatggcgttttgagg
cataaagctctacaatgtgctaatttatatgaatacctaatcaccttgcctgaagatgta
attgacactctcttttcatatcccataatttgtttagctgtttaccgtgatttaccaaat
attggtaagcattatgttatgcgagtcttatttgttgaacaacctgttcctcaggctgta
attgcttcttgggttggtcaagaatattccaaggagcacactgaagttgttgaggttcta
tcgaaactaaaagtatggcaagaggcttcgataccaggtggattgcctgcttgggccttg
aatgtcacattcaagaaaaatttgaaggtagccatttttggtggaggctcaagttgggga
tgtaatcccaatatggaagcagatactaaagcaagagatgttgaatacctggacaaatat
gctatggaaaggtgggaatgtgtacttcattacatggttggatctcaacaacaggaagga
atctctgctgacgctgttcgaatattacttcatgctggcctaatgaagagagatgatgat
gatggcagtcctgtgattactagagatggctttcagtttcttcttctggatactccagca
caagtttggtattttatgcttcagtatcttgacactgtgtatgctagggggatggatctc
gcacaatgcttagcttttctgttccaattgagcttcagcattctaggtaaggactatagt
actgaaggattgagtgaaagcctccttacctttctacaacacttaagagaatttggtttg
gtctatcaacgaaaaaggaaaggaggaaaattctaccctaccagattagctcttaatatg
acaagacaaaagggtaagtcagaaataagtagtcaagaaggtttcgttattgtggagtca
aattacagagtgtatgcctatactgattctaacttgaaagtagctctaattgggttattt
actgaattactctatagatttcctaatatgtgtgttggaaccttaacaagggattctgta
tgtatggccctccggagtggtatcacttctgaacaaatcataagattcttgaccctccat
gcacactctttgttgatcgctaaaggtggacccgtcatcccaccgactatcagtgaccag
atacgtttatgggaaaaggaaagggacaggttttctttcacagaaggaatcctttacagt
cagttcctatcacattcagatttctctgttcttagagactatgcttctgaacagaattgt
ttaatatggcattgtgataaacgcagaaccatggtagttactaaacaaggacatgatgat
gtaaaaaaattttggaaaaaacattctaaaggtcccatttcaaattgttaa
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