Halobacterium hubeiense: Hhub_2028 Help Entry Hhub_2028         CDS       T04202                                  Symbol ligB Name (GenBank) DNA ligase (ATP)   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism hhb  Halobacterium hubeiense Pathway hhb03030   DNA replication hhb03410   Base excision repair hhb03420   Nucleotide excision repair hhb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hhb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Hhub_2028 (ligB)    03410 Base excision repair     Hhub_2028 (ligB)    03420 Nucleotide excision repair     Hhub_2028 (ligB)    03430 Mismatch repair     Hhub_2028 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hhb03032]     Hhub_2028 (ligB)    03400 DNA repair and recombination proteins [BR:hhb03400]     Hhub_2028 (ligB) Enzymes [BR:hhb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      Hhub_2028 (ligB)     6.5.1.6  DNA ligase (ATP or NAD+)      Hhub_2028 (ligB)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      Hhub_2028 (ligB) DNA replication proteins [BR:hhb03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     Hhub_2028 (ligB)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      Hhub_2028 (ligB) DNA repair and recombination proteins [BR:hhb03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      Hhub_2028 (ligB)    NER (nucleotide excision repair)     Other NER factors      Hhub_2028 (ligB)    MMR (mismatch excision repair)     Other MMR factors      Hhub_2028 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase EccE FtsA CinA_KH Motif Other DBs NCBI-ProteinID:  CQH53974 UniProt:  A0A0U5CXB7 LinkDB All DBs Position I:complement(953106..954773) Genome browser AA seq 555 aa AA seqDB search MEFGSFAAHAADVEATDADLDVVAKVAALFGEAGDDLAVVARFVQGRVFPAHSETKLDIG PRLCYEALARAASTNVTVEDVEDRLAETGDIGEVAANLDLGGQAGLGAFAADSGDDDLTV AEVYEDLTALAAAEGDGSQDEKVTLLFGLFNDCSGEEARYLARLVLGEMRIGVGEGAVRD AIAEAFDVPVEAAERALQVSNDYGLVAVTARDEGEDGLDELHLEVGRPVQAMLAQAGTVT DALDEWEEAAVETKFDGARVQVHWDGDEVSLYSRNMEDVTDALPELVEFVEEHVDAPVIL DGEVVAVDDDGSPLPFQEILKRFRRKHDVAEMRDEIRVELNAFDCLHAHGEDLLDEPFRK RHERLRDVVDDDSAVSEILVTDDADEIAAFEERALEAGHEGIMLKDPDAAYTPGDRGKHW LKRKPDVETLDLVVTGAEWGEGRRASFLGTFVLSARDEETGEYATIGKVATGITDEELAD LTDLLEPHIRSEDGQEVDLEPAVVFEVGYEEIQTSPTYESGYALRFPRFVTVREDKPPED ADTIERVERLAEQQG NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atggaattcggttcgttcgccgcgcacgccgccgacgtggaggcgacggacgcggacctc gacgtcgtcgcgaaggtcgcggccctgttcggcgaggccggcgacgacctcgcggtggtc gcgcggttcgtccaggggcgggtgttcccggcgcactcggagacgaaactcgacatcggg ccgcggctctgctacgaggcgctggcgcgcgcggcgtccacgaacgtcaccgtcgaggac gtcgaggaccggctcgccgagacgggtgacatcggcgaggtcgctgcgaacctcgacctc ggcggacaggcgggactgggcgcgttcgcggcggacagcggcgacgacgacctgaccgtc gccgaggtgtacgaggacttgactgcgctggcggccgcggagggcgacggcagccaggac gagaaagtcaccctcctcttcgggctgttcaacgactgctcgggcgaggaagcacgatac ctcgcgcggctcgtgctcggggagatgcgcatcggcgtcggcgagggcgcggtccgggac gccatcgcggaagcgttcgacgtgcccgtcgaggctgccgagcgcgcgctccaagtctcg aacgactacgggctcgtggccgtgaccgcccgcgacgagggcgaggacggcctcgacgag ctacacctggaagtcgggcggcccgtgcaggcgatgctcgcgcaggccggcacggtcacc gacgccctcgacgagtgggaggaggccgccgtggagacgaagttcgacggcgcgcgcgtc caggtccactgggacggcgacgaggtgtcgctgtactcgcggaacatggaggacgtcacg gacgcgctccccgaactcgtggagttcgtcgaggagcacgtcgacgcgcccgtaattttg gacggcgaggtggtcgcggtcgacgacgacgggagcccgctgccgttccaagagattctc aagcgcttccggcgcaagcacgacgtcgccgagatgcgcgacgagattcgcgtcgaactg aacgccttcgactgtctgcacgcccacggtgaggacttgctggacgaaccgttccggaag cgtcacgagcgcctccgcgacgtcgtcgacgacgactccgcagtctcggagattctggtc acggacgacgccgacgagattgcggccttcgaggagcgcgccctcgaagccggccacgag ggcatcatgctgaaagaccccgacgcggcgtacacgcccggtgaccgcgggaagcactgg ctgaagcgcaagcccgacgtggagacgctcgatttggtcgtgacgggcgcggagtggggc gagggccggcgcgcgtcgttcctcgggacgttcgtgctctccgcgcgcgacgaggaaacc ggcgagtacgcgaccatcgggaaggtcgccaccggcatcaccgacgaggaactcgcggac ctcacggacctcctggagccacacatccgctcggaggacggacaggaagtggacctcgaa cccgccgtcgtcttcgaggtcggctacgaggagattcagacgtcgccgacctacgagtcg gggtacgcgctccggttcccgcgattcgtcaccgtccgtgaggacaaacccccggaggac gccgacaccatcgagcgcgtcgaacgcctcgccgagcagcagggctga

DBGET integrated database retrieval system