Ectothiorhodospira haloalkaliphila: M911_12230
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Entry
M911_12230 CDS
T03059
Name
(GenBank) helicase SNF2
Organism
hhc
Ectothiorhodospira haloalkaliphila
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHK79789
UniProt:
W8KJ33
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Position
2534195..2537440
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AA seq
1081 aa
AA seq
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MSKSRRRPPLTLDIIKNAVDHRTFQRGKRYFQEDRVIFVDVIQDDPDELYFIAETEGGRD
EIYHQTVVAKPGRDRRTLGLFGDCTCPVGIQCKHMVAACLAYIDGEAIISMPDEGHNFTD
WLLEMAPDAPPTPAERTSDDFLIYQLDRIETGAGTGFGVSFRVAKTKKNGQTALGREVGM
HSLMNPYGVPPEYLCPTDRDILNQLHVSDPRFQAPVKLQGLAGGIAMDLMLDSGRLFLGR
DRVQPLHRGEPRPVELTWVEEAGEFRLVAQTDPKGGLPINLRPPRYVDLETHEVGGLEIP
DGLDANWLSRIPDAPPVTPEELQQVSETLAVYYPQLPKPKALNVRSVKDVSPIPLLTVRV
DTLNLTRSALNLQFIYENLTLTPDHPGAIAMGRVNGVIVEIHRDLAGEEKAIERLGQEGL
VRNPKVSGEFTLATLGISQQVIMTRWLEVLNQALPRLKEEGWRIHHEEGDIPRLDVAEDV
HAQVDEGNGWFDLHFDLEVDGRKVPLLPLVSELIGSYQPGRLPPTLALPMQDGSYVQVTR
EQIEPVLQAIIDLYDHLAPGQQSLRLSRLDAPRLLELGDAKVQGGQDLQHMARRLTQFEA
LTPVEPPRDFRGDLRAYQQQGLNWLQFLREYQLGGVLADHMGLGKTVQTLAHLAIEKQAG
RLDHPALIVAPTSLMSNWRREAEQFTPDLKVLTLHGPDRKRYYEQLPGMDLALTTYPLLP
RDSEELLAQDFSFLILDEAQQIKNPRAQASQVVRRIKATHRLCLTGTPMENHLGELWAQF
DFLMPGFLGGQEQFSRTYRTPIEKHNDGDKLRRLTRRTTPFMLRRTKDIVAKELPGKTEL
LRSTPISGKQAALYESIRLAMEKKVRDAIAKRGLARSHITVLDALLKLRQVCCDPRLLPA
SAQAGSAPSAKLQMLMEMLPELLDEGRRVLLFSQFTTMLGLIEQELKKAHIGYSKLTGQT
RKREEALDIFRNGHANLMLISLKAGGVGLNLTEADTVIHYDPWWNPAVESQATDRAHRIG
QDKPVFVYKLITENTVEEKILAMQARKQKLADNVYGDEKRDADEPPIDADMIHALFAPEP
G
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcacgccgtcgcccacccctcacgctggatatcatcaagaacgctgtcgac
catcgcaccttccagcgaggcaagagatatttccaggaagaccgagtcatcttcgtggat
gtgatacaggacgacccggacgagttgtatttcatcgcggaaaccgagggagggcgggat
gaaatctaccaccagaccgtggtggccaagcccggacgtgatcggcggaccctgggcctg
ttcggcgactgcacctgccccgtcggcatccagtgcaagcacatggtggcagcttgtctg
gcctacatcgatggcgaggccatcatttccatgccggatgaagggcacaacttcaccgac
tggctgctggagatggcaccagacgccccgcccacccccgccgaacgcaccagcgacgat
ttcctcatttaccagctggaccggatcgagaccggcgcaggcaccgggttcggtgtgagc
tttcgcgtagccaagacaaaaaagaacggccagaccgccctgggacgcgaagtgggcatg
cactccctgatgaatccttacggagtgcctccggaatatctgtgccccaccgatcgggat
attctgaaccagctccatgtcagtgacccacgcttccaggcacccgtcaaacttcagggc
ctggcgggcgggattgccatggacctgatgctggactcgggacggctgttcctggggcgg
gaccgtgttcaacccttgcaccgtggggagcctcgaccggtggagctgacctgggtggaa
gaggccggcgagttccgcctggtggcccaaaccgacccaaagggcgggctgcccatcaac
ctgcgtccgccccgctatgtggacctggaaacccacgaagtgggcggcctggagattccc
gatggtcttgatgccaactggctcagtcgcatcccggacgcccctcccgttacccccgaa
gaactgcagcaggtgagcgagaccctggcggtctactaccctcaattacccaagcccaag
gcactgaacgtgcgctcggtaaaggatgtaagcccgattccactcctgaccgtgcgggtg
gacacgctgaacctgacccgttcagccctgaacctgcagttcatctacgagaacctgaca
ctcacgcccgatcacccgggtgccatcgccatgggcagggtgaatggggtgatcgtggag
atacaccgggatctggccggggaagaaaaggccatcgaacgccttggccaggagggactg
gtgcgcaaccccaaggtgtccggtgaattcaccctggccaccctgggcatcagccagcag
gtgatcatgacccgctggctggaagtactcaaccaggcactcccccggctgaaggaggaa
ggctggcgcatccatcacgaagaaggggacatcccgagactggacgtggccgaggacgtc
cacgcccaggtggacgaaggcaacggctggttcgacctgcacttcgacctggaggtggac
ggtcgcaaggtgcccctgctgcccctggtgagcgaactcatcggcagttatcaacccggg
cgtctgccacccaccctggccctgcccatgcaggatggcagttacgtgcaggtgacccgc
gagcagatcgagcccgtgctgcaggccattatcgacctgtacgaccacctggcacccggg
cagcagagcctgcgcctgtcccgcctggatgcgccccggctgctggaactgggagatgcc
aaggtccagggtggccaggacctgcaacacatggcgcgccgtctcacccagttcgaggcc
ctcaccccggtcgagccaccccgggatttccggggagacctgcgcgcttatcagcagcaa
ggcttgaactggctgcagttcctgcgggaatatcagttgggcggtgtgctggccgatcac
atgggcctgggaaagaccgtgcagaccctggcgcacctggccatcgagaagcaggccggt
cgcctggaccacccggccctgatcgtcgcgcccaccagtctgatgagcaactggcgtcgg
gaggccgaacagttcacgccggatctcaaggtgctcacccttcatgggccggaccgcaaa
cggtattacgagcagttgcccgggatggacctggcactgactacctaccccctgcttccc
cgcgacagcgaggaactcctggcccaggatttcagctttctgatcctggacgaggctcag
caaatcaagaatcctcgtgcccaggcctcccaggtggtgcgtcgcatcaaggccacccat
cgcctctgtctcaccggcacgcccatggagaaccacctgggggagctatgggcccagttc
gatttcctgatgccgggttttctgggcggccaggagcagttctcccgcacctatcgcacc
cccatcgagaaacacaacgatggcgacaagcttcggcgccttacccggcgcaccacccct
ttcatgctccggcgcaccaaagacatcgttgccaaggaactgcccggcaagaccgaacta
ctgcgcagcacccccatcagcggcaagcaggccgccctgtacgagagcatccgtctggcc
atggagaagaaggtgcgcgacgccatcgccaagcgcggcctggcccgcagccacatcacg
gtgctcgacgccctgctcaagctgcgtcaggtgtgctgcgacccgcgcctgctgcccgcc
agcgcccaggccggctccgcgccttcggccaagttgcagatgctcatggagatgctgccg
gagctactggacgaaggccgccgcgtgctgctgttctcccagttcaccaccatgctggga
ttgatcgagcaggaattgaaaaaggcccatatcggctattccaagctcaccgggcagacc
cgcaagcgcgaggaggcgctggatatcttccgcaacggtcacgccaacctcatgctgatc
agtctcaaggccggcggcgtgggcctgaacctcaccgaggccgatacggtgatccactac
gacccctggtggaatccggcagtggaatcccaggccacggaccgggcccaccgcatcggc
caggacaagccggtgttcgtgtacaagctgatcacggaaaacaccgtggaagagaagatc
ctggccatgcaggcccgcaagcagaagctggcggacaatgtctatggggatgagaaacgg
gatgcggatgagcccccgatcgacgcggacatgatccatgccctgtttgcacccgaaccg
gggtag
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