Halobacillus halophilus: HBHAL_3838
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Entry
HBHAL_3838 CDS
T02031
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
hhd
Halobacillus halophilus
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhd03009
]
HBHAL_3838
Enzymes [BR:
hhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HBHAL_3838
Ribosome biogenesis [BR:
hhd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HBHAL_3838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DDE_Tnp_ISAZ013
Motif
Other DBs
NCBI-ProteinID:
CCG46182
UniProt:
I0JPW2
LinkDB
All DBs
Position
complement(2800681..2801403)
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AA seq
240 aa
AA seq
DB search
MRIDKLLANMGYGTRKEVKSLLKGGNVRVNGQPEKSPKTHINTEADEITVMGEEVEYREF
IYIMMNKPGDLISATEDANETTVIDILQPEDTVFSPFPVGRLDKDTEGLLLITNDGQLNH
RLTSPKKDVGKTYFAIIEGKVTEKDAEDFSKGVTLDDGYKTKPAELNILVSDDHSEIELT
ITEGKFHQVKRMFEAVDKKVVYLKRIKMGSLELDPHLELGEYRELREEELNYLFSITNLE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgataaattgttagccaacatgggctatggaacacgcaaagaggtaaagtct
ctgcttaaaggtgggaacgtgcgagtaaatggacagccggagaagagtcctaaaacccac
attaatacagaagcagacgaaattactgtgatgggagaagaagtggagtaccgggagttt
atttacattatgatgaataagccaggggaccttatctctgctactgaagacgccaatgag
actaccgtcattgatattcttcagccggaagataccgtatttagtccttttccagtaggc
cgcctggataaagatacggaaggacttttgctgatcacgaatgatggacagttaaatcat
aggctgacttctccaaaaaaagatgttgggaaaacatattttgcgattattgaaggaaaa
gtaacagagaaagatgcagaagacttttccaagggtgttacgcttgatgatggatacaaa
accaaacccgccgagcttaatatccttgtatctgatgaccactccgagattgaattgacc
attacggaaggaaaattccatcaagtaaaacgaatgtttgaagcagtcgataaaaaagtg
gtctatctaaaacgtattaaaatgggatctctggaacttgacccacatttagaattgggg
gaatatcgagagctgcgggaagaggaactcaactatttattttccattactaatcttgaa
taa
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