Halomicronema hongdechloris: XM38_030600
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Entry
XM38_030600 CDS
T04928
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hhg
Halomicronema hongdechloris
Pathway
hhg00521
Streptomycin biosynthesis
hhg00541
O-Antigen nucleotide sugar biosynthesis
hhg01100
Metabolic pathways
hhg01110
Biosynthesis of secondary metabolites
hhg01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hhg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XM38_030600 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XM38_030600 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XM38_030600 (rfbC)
Enzymes [BR:
hhg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XM38_030600 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Cupin_2
FdtA
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
ASC72106
UniProt:
A0A1Z3HPB8
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Position
complement(3224363..3224923)
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AA seq
186 aa
AA seq
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MNCWESKIPGCYEIQLRVFQDHRGKFVKTFHQGIFEDQNLETQFSETYYSISSKNVLRGL
HFQVPPKDHVKLVHCLQGEILDAVVDLRVGAPTYGQYETFHLTEDKGNSVYIPAGLAHGF
YILSEQAVVIYQVSTVYAPQYEQGILWDSANIPWPTDNPNISGKDSNWKSLSEFKSPFVY
NAPSFV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgctgggaaagtaaaattccgggatgctacgaaatacaattaagagtatttcaa
gatcatcgaggaaagtttgtgaaaacttttcatcaaggaatatttgaagaccaaaatcta
gaaacccaattttctgaaacttattactcgatctcttccaaaaatgtgttgagaggatta
catttccaagttcctccaaaagatcatgttaagttagtccattgcctacaaggagagatt
ctagatgctgtagttgatttaagagttggagcacctacatatggccaatatgagacgttt
catttaaccgaagacaaaggtaattcagtatatattccggctggattggcccatggattt
tatatattgagcgagcaggcagtagttatttatcaagtttcaactgtttatgctcctcag
tatgagcaaggtattctttgggactctgcaaatattccttggcctacagataatcctaac
atttcaggaaaagatagtaattggaaatctttatctgagtttaagagcccatttgtctat
aatgctcccagctttgtatga
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