Halomonas hydrothermalis: CLM76_14415
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Entry
CLM76_14415 CDS
T05117
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM76_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhh03019
]
CLM76_14415
Messenger RNA biogenesis [BR:
hhh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLM76_14415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ATH78704
LinkDB
All DBs
Position
complement(3076396..3077994)
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AA seq
532 aa
AA seq
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MNLTLYGYDDQWIAVDCGMMIRQDLPNSPLQVPNTDTLQTLGITPAALFITHGHEDHIGA
VAWLWPRWGCPIFATPLAAGLLRHKFAEHQLSSAAIEIIEPGDAVERGPFTLRYLSVTHS
IPESCAIMMQAGDYRVLHTGDWKLDPEPLIGAPVNAAHFRALAPLDLVVGDSTNAPMPGQ
SASEGDVAKALASTLAKCKGRVVVSCFASNLARVLAIGRAAQACGRRVSLMGRSMERMVS
VARGLGYLDDFPALVPPHDLGYLPPEEVVIIATGSQGEPRAALQRLAQRRHPFVDLEPGD
SVIFSAKAIPGNERPIEQLKKRLLQLGVDLFDENNHPELHATGHPAQEELKKLYQWVRPK
ALLPVHGEARHQQAHQALAEQLGISAPLAPLNGDMIALDNQGLRLETRHPQPPCIVDQNS
VRPHPGLEHQTPGARRGSLFLALPVTATETGWWRIGRMMLDTTGASPLDEESFSDWLDEQ
LEEIEAETLADLRQALQPRLMHWLANHLQHMPEVHLQIMAADMPTEEELDQQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacgctgtatggatacgacgatcagtggatcgccgtcgattgcggcatgatg
attcgtcaggatctgcccaactcgccgctgcaggtacccaacaccgacaccctgcagacc
ctcggtatcacgcctgccgcgctgttcatcacccatggtcatgaagaccacatcggcgcc
gtggcctggctatggccgcgctggggctgccctatttttgccaccccgctggcggcgggc
ctgctgcgccacaagtttgccgaacaccagctcagcagcgctgccatcgaaatcatcgaa
cccggcgatgcagttgagcgcgggccctttaccctgcgttacttgagtgtcacccactcc
atacctgaaagctgcgccatcatgatgcaggcaggcgactatcgggttctgcatacgggt
gactggaaactggacccggagccgctcatcggtgcgccggtgaatgccgcccatttccgc
gcactggcccctctggacctggtggtgggtgactccaccaatgcccccatgccagggcag
tcggccagcgaaggcgacgtcgccaaggcactggccagcacccttgcgaagtgcaagggg
cgcgtcgtggtgtcgtgtttcgccagcaacctggcgagggttctggccatcgggcgtgcc
gcacaagcctgcggacgccgtgtcagcttgatgggccgctccatggagcgcatggtgagc
gtggccagagggttaggctacctggacgattttccggcactggtaccgccccacgatctt
ggctatttgccccccgaagaagtcgtgatcattgccacgggcagtcagggtgagccacgc
gctgcgcttcaacgactggcgcaacgccgtcatcccttcgtcgacctggagcccggtgac
agcgtcattttttccgccaaggccatcccgggcaatgagcgccccatcgaacagcttaaa
aaacgtttgttacagctgggtgtcgatctcttcgatgaaaacaatcatcccgagctgcat
gccacagggcatccagcccaagaagagctcaagaagctttaccaatgggtacgcccaaaa
gccctgctacccgtgcacggcgaagctcgacatcagcaggcccaccaggcactggccgaa
cagctgggcatcagcgcgccccttgcgccgctcaatggcgacatgatcgcgctggacaac
cagggcctgcgcctggaaacacgccacccccagccaccttgcatcgtcgatcaaaacagc
gtgaggccccaccccgggctcgagcaccagactcccggcgcacggcgcggaagcctgttt
ctggcactaccggtcaccgccaccgagaccggctggtggcgcattggacggatgatgctg
gataccacgggagccagcccgctggacgaagagagcttcagcgattggctggacgagcag
ttggaagagatcgaggccgagaccctggcagacttgcgccaggcgctgcaaccgcgcctg
atgcactggctggccaaccaccttcagcacatgcctgaggtgcacctgcagatcatggcc
gccgacatgccgaccgaagaggaactggaccaacagtag
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