Hippoglossus hippoglossus (Atlantic halibut): 117753128
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Entry
117753128 CDS
T07778
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117753128 (trim16)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117753128 (trim16)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
Motif
Other DBs
NCBI-GeneID:
117753128
NCBI-ProteinID:
XP_034426927
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Position
19:complement(1544104..1550968)
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AA seq
620 aa
AA seq
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MADTAAPTSTQQPAAACGPPACSSCLGDKSKGCPQCLKSPDKPQPAEGLKQNGTEAETQV
SKEETPDTKTAEEIKIQDDLKESEVPTKLEEEKKEAQSDEEKKNEAKEEVKEEEAKEEPL
GPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEPLRDIERRTCE
SHKWPLEIFCCADSCCICQDCVTEDHTGHNTVPVVEARKRIEGELKEKQTEMVKTVTAAE
NAINKLQLNTVSIEQSVTEVRAVIESQFEELQAVMERAKREVTEILEGEEKQALKQAEGI
RVHLEQRCTDLKKTQAQVEKISKNKNDVDFLQEYSEWKKEAPDISLPGVYIGLMDRLNSF
SRVIVDSTRELCAKLVSSYIEKVKETCNNDHLGIKTTVHAIISSKENKSIPDPKKHADFL
KYAAHVSFEAVTAHKFLRLTEENRKVTNTTPWQHPYPDAPERFENWRQVLATESFYMGRH
YFEVDISGEGTHVGLTYKSIDRKGSESNSCITGNNFSWCLQWNAKTFSAWHSGVETPLNV
EKFTRIGVYVDYTRGLLAFYGVEDTMTLIHEYKAEFLEPLYPAFWLSKKENIVALVAPGE
PLRLKSPSPPTSPLNTSTVS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacagcagctcccacctccacacagcagccggcggcggcctgcggccccccc
gcttgcagctcctgcctcggggacaaaagtaaaggatgtccacagtgtctgaagagtcca
gacaagcctcagccggctgagggtctcaagcagaacggaacagaggctgagactcaggtg
agcaaagaggaaactccagacaccaagacagcagaggagatcaagatccaagacgacctg
aaggagtccgaggtccccacgaagctggaggaggagaagaaagaagctcagtccgatgag
gagaagaagaatgaagctaaagaggaggtgaaggaagaggaggccaaggaggaacctctg
ggccccgacgacgtggtgtgcgactcctgcatcgagagcccctgcagggccctgaagtcc
tgcctcacctgcctagtgtcgtactgtgaggctcacctccggcctcacctggagaacccc
aagttccagaaccaccggctggtggagccgctcagggacatcgagaggaggacctgcgag
agccacaagtggcccctggagatcttctgctgcgctgactcctgctgcatctgccaggac
tgtgtgaccgaagaccacacgggccacaacaccgtccccgtggtggaggctcgcaagcgg
atagagggggaactgaaggagaagcagacggagatggtgaagacggtgacggctgcagag
aacgccatcaacaagctgcagctaaacacagtctccatagagcaatcggtgacggaggtg
cgagccgtgatcgagagccagttcgaggagctgcaggcggtgatggagagggccaagagg
gaggtgacggagatcctggagggcgaggagaagcaggcgctgaagcaggccgagggcatc
cgggttcacctggagcagaggtgcacggacctgaagaagactcaggcgcaggtggagaag
atttccaagaacaagaacgatgtggatttcttacaggagtattccgagtggaagaaagaa
gcccctgacatctctttgcctggggtctacatcggcctgatggaccgtctgaactccttc
agccgtgtgatcgtggactccacacgggagctctgtgccaagctcgtgtcctcgtacata
gaaaaagttaaagagacctgcaataacgaccatctgggaataaaaacaacggttcatgcg
attatctcatcgaaggagaacaagtcgattccagatccaaagaaacacgccgacttcctc
aagtacgccgcccatgtgagtttcgaagctgtcaccgctcataagttcctgcgtctgacg
gaggagaacaggaaggtgactaacaccacgccctggcagcatccgtaccccgacgcacct
gagcgcttcgagaactggcggcaggttctggccacggagagcttctatatggggcgccac
tactttgaggtggacatcagcggcgaggggacgcacgtgggcctgacctacaagagcatc
gaccgcaagggcagcgagagcaacagctgcatcacgggcaacaacttctcctggtgtctg
cagtggaacgctaaaaccttctccgcctggcacagcggcgtggaaacccccctcaacgtg
gagaagttcactcgcatcggcgtctacgttgactacacgcgaggcctcctggctttctac
ggcgtggaggacaccatgacgctcatccacgagtacaaggcagagttcctggagcctctc
tacccggcgttctggttgtcgaagaaggagaacatcgtggccctggtggcgcctggcgaa
ccgttacggctcaagagcccctctccaccaacatcacctctaaacacatccacagtttca
taa
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