Hippoglossus hippoglossus (Atlantic halibut): 117756052
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Entry
117756052 CDS
T07778
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117756052 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117756052 (fancm)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117756052 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Motif
Other DBs
NCBI-GeneID:
117756052
NCBI-ProteinID:
XP_034432232
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All DBs
Position
22:10590664..10635349
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AA seq
2079 aa
AA seq
DB search
MSAGSNQRTLFQTWGSAAPQNKSAQPRKDGVKAAGRRRTTPSNSSQVPATLPPPNPLWTE
IGQGSSHPAQTPVRTEEPCADEDDDDDLMVVAVYEAEKSLRLDNANFPQDDNPAGAEASA
GSPAPSAGQTYPELPGFDSSSAKVWIYPTNYPLREYQLKISEAALFHNTLVCLPTGLGKT
FIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGTPQAHMAELTGSTAAKQRQ
AIWRSKRLFFLTPQVMVNDLSRGTCPAQQVKCVVIDEAHKALGNHAYCQVIRQLGSQTLQ
FRILALSATPGGDTKSVQSVISNLLISHIELRSEESPDIRAHSHQRSVDKVVVPLGEALS
AHQARYLQVLEKFMSRLVQNRVMAHKDLRTLSKYQLILARDQFRKNPPPQLKGPQQGMLE
GDFALCISLYHGYELLMQMGLRSLFFYIQGIIDGSREMSRARNELQRTPTFMDLYHEMKD
MFVKPSAGPDEPFIYSHPKLEKLEGVVLQHFRQWAESSAHNDALGAESTRVMIFSSFRES
VQEIADMLNRQAPMIRVMTFMGQASAGKGVKGFTQKEQLEVVHRFRQGGFNTLVSTCVGE
EGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRKRQGRIVVIVAEGREERTYNQSQSNKRS
VHKSITGNHSGFHMYPNSPRMLPDGVHPTLHKMHITCGQFDHKESSRASVGGRRSHCDSR
TSLIHPRNLFQQSRATSDGFLSSAEYSLWASTMRLQDGEAHPTLKQSHFVSIPSDLPPQE
ERGKGGAPSRELCLWEWRHWQHKELPTHVVDHSLRCRHFIQVMELVDGMKEENEGECHYE
QELLPYLHNANTGGDMRKRQKKQKSVKTSAQKPKPSHSTSDLECMEEVESDFTDHRAPDA
ICPLPSKNDCPEADLDDDCVIIKEGVINSDIISQLSANIDEEDVELEAMFYLPRWDSAPP
PSSAELLPGTCESLKVILANVAELLSRPPLLPPAELEADVAAPSLPPPHQQLLQPFHVSF
TLDIDDDDDDEMLMSEADNASPRTVSYQHPAGEEDSKNCSDPPHQGQTPVRVAASSPTWD
EVFGEEEDNMEADDEMNNNFKKQQIGEEAEKSKEIKNNSDNTSEEKVLWDNVRTEETPHS
TVGGVSVDRASRCSPHMDDSMDLFGDDEAFLQMTIPDIPTPGVTPRRSTCAGDVSDSIKR
KSDASQMQNTTDLFSTVPTADSRQILHTMQTDDLKCTKHVTHTPHAKLKTHDAATCNNRD
KIISAHCKSPTVQQNAESCDRSHDYFSVNFDLGYSLEDSEDEADVEAVPALCTLSSPEPK
KQAADSPASLSTVSNSSTPYNRFSAQRIPAQCHESKLSTPRKFSVQRNREMSPLLTFKSG
ALPSPITSVGARRTLVPGPFRPSLLSSSKHRRPAGCAAEVKGGSGAENKSLQESVWVSDS
PPHPEGSNNDSEDEVVVLKRRHQNVFNNLSSPEVSKISDVDSPVVVNRKRAAPLNTSDET
EGEAVSDDDFQNESVFARRTPAQGGERKRVRRAEAKHAACRKGRQFLQEEAELSGDEEGV
DVSSDEEDGDDQNQSLDGFVVNNTHFSQGLNDSEMHGVYLKSVRSPAVHGKFKMSYRTHR
TDIFSQVPELDETYAEDSFVVGSEVEEVESSEEEAEDVQLMPDDSYVDGKRQYATRRRVL
LHNVRARARPGGKIAAEASSEQRAEEKTKRTRIIRVNDSSDEETGEVSEESLTAGGSVAV
TSRQKAAQPEPSRHQQQKAPSSSSPTIASKVSLLSKGRRSSESEEQLNERCRQRLENQHL
LSDELDFEKSVSPLTSKNPPKAPPTTSSAPQPRGSVCQGASVSEAPAPPGSVCILVDSRC
ISTGVELMTSLRQRHAATVHVCSLDGSYFIVSNRMAVEKHSQLDLAAMQNRKRLVERVNS
LQGLFERVCLIVEKDRSKPGEASRPFQRTRFYDGTLAGLVRTGVRLLWSDGAEESASLLA
DLARLEQRKGQGISAPLEVRGQHKQQALQLYLSLPSVSFVHALNMSHNFKSVAQLMNSSI
EAIQKGGCMSTSRAEEIYRFLRYPCDTFLMNTSKAGKNS
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggttccaaccagaggactttgttccagacgtggggctccgccgcgccccaa
aacaaatccgctcaaccgaggaaagatggcgtgaaagccgctggacggcgcaggacaacc
ccgagcaactcatctcaggtccccgcaacacttcctcctcctaaccccctgtggactgag
atcggtcaggggtcctcacacccggcgcagaccccagtgaggacagaggagccctgtgca
gatgaagatgacgatgatgatctcatggtggttgctgtctacgaggctgaaaagagcctg
agacttgacaatgcgaactttccccaagatgacaaccctgcaggagcagaggccagtgcc
gggtctccagccccatcagctgggcagacatacccagagctccccggctttgacagctcc
tcagctaaagtgtggatctaccccaccaactaccccctcagggagtaccagctgaagatc
tcagaggcggctctgttccacaacacactggtgtgtctgcccactggtctggggaaaacc
ttcatcgcctctgtggtcatgtacaacttctaccgctggtatccatcggggaagatcgtg
ttcatggcccccaccaaacccctggtggcacagcagatcgaagcctgctataaagtgatg
gggaccccacaggcccacatggctgagctgacaggcagcacagcagcaaagcagagacag
gcgatatggaggtccaagcgcctcttcttcctcacccctcaggtgatggtgaacgatttg
tccagaggcacctgcccagcgcagcaggtgaagtgtgtggtgatcgatgaggcccacaag
gcactgggcaaccacgcttactgtcaggtgatcagacagctcgggagccaaactctgcaa
ttccgcatcctggccctgagcgcaaccccagggggggatacaaagtcggtgcagtcggtg
atctctaatttgctcatctcccacatcgagctgcgttcagaggaaagccccgacatcagg
gcccactcccaccagcgcagcgtagataaagtggtggttcctctgggagaggccctctct
gctcaccaggcgcgctacctgcaggtgctggagaaattcatgtctcgtctggtgcagaac
cgggtgatggctcacaaggacctgaggactctcagcaaataccagctcatcctcgccaga
gaccagttccgcaaaaacccacccccgcaactcaagggtccacagcaggggatgctggag
ggcgactttgccctctgcatcagcttgtaccacggatacgagctgctgatgcagatgggc
ctgcgatcgctcttcttttacatccagggaatcatagacggatccagagagatgtccagg
gcgaggaatgagctgcagaggacccccaccttcatggacctctaccatgagatgaaagat
atgtttgtgaagccgtctgctggtccagatgagccgttcatttatagtcaccccaaactg
gagaaactggaaggggtggtgctgcagcatttccgacagtgggctgagagctcggcacac
aatgatgctcttggggcggagagcacgcgggtgatgatcttctcatctttccgggaaagc
gtgcaggagatcgccgacatgttgaaccgccaggctccgatgatcagggtcatgaccttt
atgggccaggcctctgctgggaagggggtcaaaggcttcacccagaaggagcagctggag
gtggtgcacaggttccgtcagggaggcttcaacacgctggtgtcgacctgcgtgggggaa
gaggggctggacatcggagaggtggacctcatcgtttgcttcgatgcgcagaagagtccc
attcgccttgtgcagcgaatgggacgtactggccgtaagcggcagggacgcatcgttgtc
atcgtggctgaaggacgcgaggagagaacgtacaaccagagccagagcaacaagcgcagt
gtgcacaagtcaatcactggcaaccacagtgggtttcacatgtatcccaacagtccccgc
atgctgccagacggagtgcaccccaccctgcacaagatgcacattacctgtggccagttt
gaccacaaggagagcagcagggcgtctgtcgggggtcgacggtcccactgtgacagccgg
acctccctcatccaccctcggaacttatttcaacagagcagggcaacatctgacgggttt
ctgagcagtgcagaatattccctgtgggcgtccaccatgaggctgcaggatggtgaagct
catccaaccctgaagcagtcacacttcgtgtccatacccagtgatctacctcctcaggag
gaacgtggcaaaggtggcgccccgtccagagagctgtgtttgtgggaatggagacactgg
cagcacaaagagttgcccacccacgtggtcgatcactccctccgctgccgccacttcatc
caggtgatggagctcgtagacggcatgaaagaggagaacgagggggagtgccattacgaa
caggagcttcttccttacctccacaatgccaacacaggtggcgacatgagaaaaagacag
aagaagcagaagagtgtaaagaccagcgctcaaaaacccaaaccgtctcattcgacatct
gatctggaatgtatggaggaagtcgagagcgacttcacagatcaccgagcgcctgacgct
atttgtcctctcccttcgaaaaatgactgtccagaagctgatctggatgatgactgtgtc
atcattaaagaaggtgtcataaattcagacattatttcccagctgagtgcaaacattgat
gaggaagatgttgagcttgaggccatgttctaccttccgaggtgggattcagctcctcct
ccctcctcggctgagctcctgccaggtacatgtgagagtctgaaggtcatcctggccaac
gtagccgagctcctctctcgacctcctttattgccgcctgcggagttagaggccgatgtg
gcagctccatcacttcctccccctcatcagcagcttcttcagccatttcacgtcagcttt
accctggatatagacgacgacgacgatgatgaaatgctgatgagcgaagccgacaatgcc
tctccgaggacggtctcataccagcatccagcaggtgaggaggacagtaaaaactgcagt
gatccgcctcatcaggggcaaacgcctgttcgtgtagcagccagcagtcccacctgggat
gaggtgtttggggaggaagaagacaacatggaggcagacgatgaaatgaacaataacttc
aagaagcaacagattggcgaggaagctgagaagagcaaggaaataaagaataactccgac
aacacgagcgaggaaaaggtcctctgggataatgtgaggactgaggaaacgccacactcg
acggttggaggtgtgagcgtcgacagggcctctcggtgcagccctcacatggacgacagc
atggatctgtttggggacgacgaagccttcctgcaaatgaccatcccagacatccccact
cctggagtcacacccaggaggtccacttgtgccggagacgtttccgacagcataaaaagg
aagtctgacgcgtcacaaatgcagaacacaacagacctgtttagcactgtgcccacagca
gacagcagacaaatattacacacaatgcaaacggatgatttaaaatgcacgaagcacgtt
acgcatactccgcatgccaagctaaaaactcatgatgcagccacttgtaacaatagagat
aagataatttcagctcactgcaaatctcccacagtgcagcaaaacgctgagtcatgtgat
aggtcccatgactacttctctgtcaactttgaccttggttattccctggaggactcagaa
gacgaagcagatgtagaggccgtccctgccttgtgtacgttgtcctctccagagcctaaa
aagcaggcagctgactccccagcttcgttgtcgaccgtttctaactcctccactccctat
aacaggttcagtgcacagagaatccccgcacagtgccatgaatctaaactgtccacaccc
cgaaagttttcagtgcagaggaacagagaaatgtcgcctcttctgacgtttaagagtggc
gctctcccctctcccatcacatcagtgggagcgaggaggacgctcgtgcccggtccattc
aggccctctttgctctccagctcgaaacatagacgaccggcgggttgcgccgccgaggtc
aaaggagggtcgggtgcggagaacaagtcacttcaggaatcggtttgggtgtctgactca
ccccctcatccagagggatccaacaatgacagtgaagatgaagttgtggttcttaaaaga
agacatcagaatgtattcaacaacttgtcgtccccagaagtgtccaagatcagtgacgtg
gactctccagtggttgtgaacaggaaacgtgcagctcctcttaacacttctgatgaaaca
gagggcgaagctgtttctgatgatgatttccagaacgagagcgtgtttgcacgccgaacg
ccagcgcagggaggcgagaggaaacgagtcagacgggctgaagccaagcacgccgcgtgt
cgcaaagggcgtcagttcctgcaggaagaagcggagctgtcaggggatgaagagggggta
gacgtgtcgtctgatgaagaggatggagatgatcagaaccagtctcttgatggatttgtg
gtcaacaacacacacttctcccagggactgaatgactcagagatgcatggggtttacctg
aagtcagtgagaagccctgcagtccacggcaagttcaaaatgtcttacagaacccatcgc
actgacatcttctcccaggtgcctgagttggatgaaacgtatgccgaggacagctttgtg
gtcggcagtgaggtggaggaggtggagagcagtgaggaagaggctgaggacgtccagctc
atgcctgacgactcgtacgtggacggtaaaaggcagtatgccaccaggcggcgtgtttta
ctgcacaacgtcagagcgagagccagacccggaggtaagatcgcggccgaagcttcttca
gagcagagagctgaggagaaaaccaagcgtacccggatcatacgcgtgaatgattccagt
gatgaggagacgggtgaagttagcgaagagagtcttacagcagggggcagtgttgctgtc
acctcgcggcaaaaggcagcacagccggagcccagcaggcatcagcagcagaaagccccc
tcctcctcgtcgccaaccatagcatctaaggtctcactgttgagtaaaggacgaaggagc
tccgagagtgaagaacagctaaatgagaggtgtcgccagaggttagaaaaccagcatctc
ctctctgatgagctcgactttgagaagtcagtgtcgccgttaacctccaagaatccaccc
aaggccccacccaccacctcctcagcgcctcagccccgggggtccgtctgtcagggtgcg
tcagtcagcgaggcccctgctcctcccgggtctgtttgcattctggtggacagtcgctgc
atcagtaccggagtggagctgatgaccagcctgcgtcagcggcacgcagccaccgtccac
gtctgctccctggacggcagctacttcatcgtcagcaaccgcatggcggtggagaagcac
agccagttggatctggcagcaatgcagaaccggaagcgattggtcgaaagagtgaacagc
ttacagggattgtttgagcgcgtttgtctgattgtggagaaggaccgaagtaagccaggt
gaagcgtcacgtccgtttcagcgcacacgattctatgacggcacgttagcggggctggta
cgcaccggggttcgcctgctgtggagcgacggcgccgaggagagcgccagcttgctggcg
gacctggctcggctggagcagcgtaaaggtcagggcatcagtgcaccgctggaggtcaga
gggcagcacaagcagcaagccctgcagctgtacctgagcctgccttcagtcagcttcgtc
cacgctctgaacatgagccacaacttcaagtccgtcgcacaactgatgaacagctccatt
gaagccatacagaaaggaggctgtatgagcacatccagagctgaggagatctaccgcttc
ctgcgctacccttgtgacactttcctcatgaacacatcaaaagcaggaaaaaacagttag
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integrated database retrieval system
