Hippoglossus hippoglossus (Atlantic halibut): 117757186
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Entry
117757186 CDS
T07778
Symbol
cylda
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04217
Necroptosis
hhip04622
RIG-I-like receptor signaling pathway
hhip04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117757186 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117757186 (cylda)
04625 C-type lectin receptor signaling pathway
117757186 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117757186 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117757186 (cylda)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117757186 (cylda)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C67
117757186 (cylda)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117757186 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
117757186
NCBI-ProteinID:
XP_034433964
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All DBs
Position
3:complement(23418704..23439728)
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AA seq
955 aa
AA seq
DB search
MSSVLWSQEKPSGGFRDDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
QCKGKKSIRILDQTNVVLSLDERDVQELDEKLAELLFPITNCEERYALLCNNSRLVRCCD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDGTGELEVDHVNLVEEDQDFPPLEINSRVLVQTRD
GPERGTIIFCDLLPGNESLGFYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSVD
PPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSASLSSDNKFHSLPFSLN
RKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPRPPTPPRGQPGLEVGSLVEVKEN
PPLCGVIRWVGLPPGLPEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCRP
DSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTEHDGLDVMVGKKKGIQGHYNSC
YLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVMK
LRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDK
KDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLL
EDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSVP
KELQDGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGF
NIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtcctgtggagccaggagaagcccagcgggggcttcagggatgactggcgc
ttctacatggtcgtgaaggagtgtacggtggagaaacctccccagaagaccctgcggatc
ccccgcggcagtcttggccaagcatgccaggagcgcaacagcctgggccgaacactgccc
caatgcaaaggcaagaaaagcatccgcattctggaccagaccaatgtggtgctgagcctg
gacgagcgggatgtgcaggagctggacgagaagctggctgagctgctgttccccattacc
aactgtgaggagagatacgccctgctctgcaacaactctcgactagtgcgctgctgtgat
attgactgtggttccaaagtgcgcgtccagctgcgctcaggggatgaacctctgcctggt
gtggtccgcttcaagggctcgctgctccctgacagagccctctctggaatctggtttgga
gtcgagctgctggaggagggccggggccaaggtttcacagagggctcctaccagggccgc
caactcttccgctgtgaggatgaatgcggcgtgtttgtggccctggacaagcttgaactc
tgggaggatgatgatgacggcacaggcgagctagaggtggaccatgtcaatctagtggaa
gaggaccaggacttccctccactggagatcaactccagggtcctggtgcagaccagggac
ggacccgagagaggcacaatcattttttgtgacctgctgccaggaaatgagagcctgggc
ttctatgtaggagttgacatggacaatcctatcggggactgggatggtgtgattgacggg
aagctgctgtgtaattttgccagtttggaacacactcgacttgtccccatctgtgacgta
atgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccagaggc
accaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggtcat
cagtgtggcagtaggagcaagtctgaattttactatactttaaatggcagctctgttgac
cccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggacccc
gccaaatcacttactgacacgccccccgacttcaaccaatcctccccgccctccagagcc
ccgccctctgcctcgttgtccagtgacaacaagttccactctctgccctttagcctgaac
cggaagaccgggcccatcgacagcatgagccatgggcctctatccctttctgtccagtcg
gtgatgggagagcagcctgagccaccgtcgcccgctgctcctccctcaccacgaccgccg
acgcctccccgaggtcagccaggcctggaggtgggctctctggtagaggtgaaggagaac
ccccctctgtgtggtgtcattcgctgggtgggtctgcctcctggcctgccggagcctctc
gccgggctggagctggaagaagagtgtcctggttgcactgacggcaccttcaaaggcacg
cgatacttcacctgcccacccaaaaaagccctgtttgtgaagctcaagtgctgccggccc
gactcccgcttcccgtccctgcaccactcctccaaccccatagagaggtgcaactccatc
gcatttgggggttacctgagtgaggttgtacatgagaacacgcccccccgcacagagcac
gatggtttggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcttgc
tacctggattcaactctcttctgccttttttcattcagttctgtactggacacggttctg
ctgaggccacgatcaaagactgacgtagaatattacagagagactcaagagctgttacgc
acagagatagtcaaccccctgcgcatacacgggtatgtttgtgccacgaaagtgatgaag
ctacggaggatactggagaaagtagaagctgcctctgggtttacctctgaagaaaaagat
cctgaggagttcctcaatatccttttccatcacatactgagggtggatccgttgctcaag
ctaaggtcggcaggacagaaagtccaggactgttacttttaccagatcttcatggacaag
aaggacaaggtgggagttcccaccatccagcagctcctcgagtggtccttcatcaacagt
gacctgaagtttgcagaggctccctcctgccttatcatccagatgccccggtttggcaag
gacttcaaaatgttcaacaagattttcccctcactagagttagacatcacagacctcctt
gaagacactccaagggaatgtcgaatctgcggaggcctggctttgtacgagtgtcgagac
tgttatgaggacggggatatcaccgctggcaagatcaaacagttctgtgaaaagtgcaat
acgcaggttcacctccacccgaggagaaaaacccatcggcacggcaaactgtccgtcccc
aaggagctgcaagacggtacggggcggcagggcagtttcccccgtcagaggatggagctg
ttcgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtcaagtacggcagcgca
gattcagcctggctcttctttgacagcatggcggaccgtgatggagggcagaacggcttc
aacatcccccaggtgtctccctgtccagaggtggaggcctacctgaagatgaccccagag
gagctgcacgctctggaccccaagagcatccagggccaggcccgacgcctgctgtgcgac
gcctacatgtgcatgtaccagagcccgaccatgagcctgtacaagtag
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