Hippoglossus hippoglossus (Atlantic halibut): 117758165
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Entry
117758165 CDS
T07778
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip02010
ABC transporters
hhip04146
Peroxisome
hhip04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117758165 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117758165 (abcd4)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117758165 (abcd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117758165 (abcd4)
Enzymes [BR:
hhip01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
117758165 (abcd4)
Transporters [BR:
hhip02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
117758165 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
FtsK_SpoIIIE
AAA_5
DUF87
NACHT
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117758165
NCBI-ProteinID:
XP_034435484
LinkDB
All DBs
Position
24:9532375..9541540
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AA seq
617 aa
AA seq
DB search
MPRPDKSEGRGTRRPELDWKFVQRLCDIQRVLFPSWTSPSSLMFATLLFVTLTEQLIIYQ
VGILPSHFYNVLADKDYAGFTSLVGTAMVLILLNSTLKSVDQYICNRMYISWRKTLTESL
HTSYFQGRVYYTLNVLRKEIDNPDQRISQDVERLCKQMSTMASRLIISPFTLTYYTYHCF
YSTGWIGPVSIFGYFVIGTIANKILMGPIVSTLYEQEKLEGDFRFKHMQIRVNAESAAFY
RSGKVEHMRTNRRLQALLLTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGIYD
GLTPGELSGLISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNVHAGPADTAFILDKLSYKSPFSDQLLVEDLSLKISQGTHLLVV
GNTGTGKTSLLRVLNRLWEADSGFVQMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGSVDDDRIIQFLELAGVSSLLKRTGGLDEEVDWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYRTCKKLGMTLVSLGHRSSLEKYHDVQLKLCGDGKWEL
TRLKGSSGGFIDRDETM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtccggacaagtccgagggaagaggaacgagaagaccagagttggactggaag
tttgttcagagattgtgcgacatccagagggtcctgttcccgtcatggaccagtccgagc
tccctgatgtttgccacgctgctgttcgtcactctgacagagcagctgatcatttaccaa
gtgggaatcctccccagtcacttctacaatgtgctggcagacaaagattacgcgggcttc
accagtctggtgggcacagccatggtgctcattttactcaactccacactgaaaagcgtg
gaccagtacatttgcaatcggatgtatattagctggaggaagacgctgactgagagcctc
catacgtcctacttccagggacgagtctattacacactcaacgtactcagaaaggaaatt
gacaacccagaccagaggatcagtcaagatgtcgagaggttgtgtaaacagatgagcacc
atggccagtcgcttgatcatctcaccgttcaccctgacttactacacctaccactgcttt
tacagcaccggctggatcggccctgtgagtatcttcggctactttgtgatcgggaccatt
gccaataaaatcctaatggggccgattgtgtcgactctgtatgagcaagaaaaactggag
ggagacttcaggttcaaacacatgcaaatccgtgtcaacgcagagtctgcagctttttac
agatctggtaaagtggagcacatgaggaccaatcggagacttcaggctctgctactaact
cagaaaagtctcataaataaagaactctggctctatatcggggtgaacaccttcgactac
ctcggaggcttcctcagctacatcataatcgccattcccatcttcaccggtatttatgat
ggtctgacccctggcgagctcagtggactcatcagtaagaacgcctttgtttgcatctac
ttgataaacggcttcacgcagctgatcgacctgtcgaccactctgtcagacgtggccgga
tacacccacaggattggggagctgagggaggtgatggatgatatcctacgcaagcagtgt
gactatgacccggcgtcaggcgaaagctacgactttgacagtgacttcaatgtccacgca
ggcccagcggacaccgccttcatcctggataaactttcgtataaatccccgttctcagac
cagctgctggtcgaggacctgagtctgaagatcagtcagggaacccacctgctggtggtg
ggcaacacgggcaccggcaaaacttcactactgagggtcctcaaccgactgtgggaggca
gacagcggttttgtccagatgacgacctgcttcgggcccagaggaaccctcttcctgcct
cagaaaccgtacctgaccgacggcacgctgcgcgaacaggttatctacccactgaaggat
atttaccctgcatcagggtcagtggacgatgacagaattatacagttcctggaattagcc
ggagtgtcgagcctcttgaagcggacaggtgggctggatgaagaagtggactggaactgg
tacgatgttctgtctccaggcgaaatgcagcgtctctgcttcgcacgactcttctacctt
cagcccaaatatgcagtgttggatgaggccaccagtgctttgacagaggaggcggaggca
caactgtacaggacgtgtaaaaagctcggtatgactctggtcagcctgggacaccgcagc
agcttggagaagtaccatgacgtccagttgaaactgtgcggagatggcaagtgggagtta
actaggttaaaaggaagcagcggcggcttcatcgacagagacgaaaccatgtga
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