Hippoglossus hippoglossus (Atlantic halibut): 117761215
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Entry
117761215 CDS
T07778
Symbol
lrig1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
117761215 (lrig1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
LRRNT
Ig_5
LRRCT
LRR_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
117761215
NCBI-ProteinID:
XP_034440805
LinkDB
All DBs
Position
5:complement(21578657..21616045)
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AA seq
1046 aa
AA seq
DB search
MAASLGRFGCVCACVFYLILTVGLFGTCGLGSDLPCAQNCTCSGDSVDCSGLELTETPVD
LPARTVSLNLGHNKLMAISAEAFSNLPNLRELRLDHNELTSIPHLGPAASKIVSLYLHHN
KIRSIDSRRTRELVSVESLDLSNNDINELRGHSFPAGLQIRDLYLSNNKISTLELGALDH
LGSTLQVLRLSRNRISQIPVRAFQLPRLTQLELNRNRIRQVEGLTFQGLSSLEVLKLQRN
SISKLTDGAFWDLAKMKVLHLDYNSLTEVNSGSLYGLSSLQQLFLSNNSIARINPDGWKF
CQKLRELNLSYNNLTRLDEGSLAVLGDLHTLRLGHNSISHITEGAFRGLKAVRILELDHN
DISGTIEDTNGAFSGLDSLNKLTLFGNKIKSVAKKAFAGLETLEHLNLGENAIRSIQPDV
FSKMKNLKSLLIESDSFLCDCQLNWLPDWLVTRGLQAGVNATCAHPESLKGTSIFQAPAS
SFVCDDLPKPQITVQPETTVTVLGSNVRLTCTAASSSSSPMTFAWRKDQELLQHAETENY
AHVQAHHQGSTQDVPGAGGGVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSSKARLI
VNVLPSFMKTPKDSTIRTGHTARLECAAEGHPSPQIAWQKDGGTDFPAARERRMHVMPDD
DVFFIMDVKPEDMGVYSCTAKNTAGTMSANATLTVLETPHLAQDLGDRNVVVGDTVALQC
KALGSPPPRITWLRNDLPLRPSDRHHFTPGNQLLVIGSASLEDAGRYTCLMSNTLGTERA
HSKLVVTQRRGPCTAAPGPSTVTIGIIVIAVVTSIVVTSLVWVCIIYQTRKKSEECSVTN
TDETNVPPDVPSYLSSQGTLSERQDVCIRVEASGGPQPNGHIVDTAGFDGAVVCTDCMEN
SNCYSKDPDYLTHGFGPAGGMEYQQHPVPPPYSHFYPAEHHDTGSTPLCNGTPNGIRNSQ
ESTFRENHNTLQVNHHDKKGSRAGQTPACSPSQEESFHKPVKLAGVTSNGRSDTDCEPEL
RQTLLSNGHALRASQNESTPLRRASD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttccctgggacgatttggatgtgtttgtgcgtgtgttttttatttaatcctg
acggtcggactgttcggtacttgtggactgggctcagacctgccctgtgcccagaactgt
acctgcagcggggattcagtggactgcagcggcctggagctgacggagacgcccgtggac
cttcctgctcggaccgtctccttaaatcttggccacaacaagttgatggccatcagcgct
gaagccttctccaacctgcccaacttgagggagctgcggctggaccacaatgagctgacc
tccataccacatttaggaccggctgcttccaagattgtatcgctctacctacatcacaac
aaaatccgcagtattgacagcaggcggaccagagagctggtgtctgtggaatctctggac
ctgagcaataatgacatcaacgagctacgagggcacagctttcctgcaggccttcaaatc
cgagacctgtacctgagcaacaacaagattagcactttagagctcggagctctggaccac
ctgggctcaacactacaggtcctgagactgagcagaaaccgcatcagccagatccccgtg
agagccttccagctcccaaggctcacccagcttgagctgaacaggaaccgtattcgccag
gtggagggtctgaccttccagggtctgtccagcctggaggtgctcaaactgcaaaggaac
agcatcagcaagcttactgacggtgccttctgggatctggcaaagatgaaagtccttcac
ctggactataacagtctgacggaggtgaacagtggctccctgtacggcctgtcttccctt
cagcagctattcctcagtaacaactctatagcccgcatcaatcctgatggatggaagttc
tgccagaagctgagggaactcaatctgtcatacaacaacttgactcgtctggatgaaggc
agcctggctgtgctgggggatctccacaccctccgtctgggccacaactccatcagccac
atcacagagggagccttcagaggcctcaaggccgtacgcatcctggagctggaccataac
gacatctcgggcacaatagaggacaccaatggggccttctctggattggacagcctcaac
aagctgactctgtttggaaacaagatcaagtcggtggccaagaaagccttcgctggcctg
gagaccctggaacacctgaacctgggagagaacgctattcgttccatccagcccgacgtc
ttcagcaagatgaagaatctcaaatcccttctcattgagagcgacagcttcctgtgcgac
tgccagctcaactggctgcccgactggttggtgacacgtggtctgcaggctggagtcaat
gccacctgtgcccacccagagagcctgaagggcaccagcatcttccaggccccggccagc
agctttgtgtgtgatgaccttccaaagccccagatcacggtgcagccagaaaccacggtg
acggtcctcggtagcaacgtgcgtctcacctgcacggctgcaagcagcagctcctccccc
atgacctttgcgtggcgaaaggaccaggagctgcttcaacacgccgagacggagaactac
gcccatgtgcaagctcaccatcaaggctccacacaggatgtgcctggtgcaggcggaggc
gtgatggagtacaccaccatcctgcacctgcgacacgtcacctttgcacatgagggccgt
taccagtgcatcatcaccaaccactttggctccacctactccagcaaggcccgcctcatt
gtcaatgttcttccgtcctttatgaagactcctaaggacagcaccatcaggacaggccac
acagccaggttggagtgcgccgctgagggccacccatctccccagatcgcctggcagaag
gacggcggcacggacttccctgccgcccgcgagcggcgaatgcacgtcatgcctgacgac
gacgtgttcttcatcatggacgtcaagccggaagacatgggcgtgtacagctgcaccgct
aaaaacacagcaggcaccatgtctgccaacgccaccctcactgttctggaaaccccccac
ctggcccaggacctgggggatcgcaacgtggtggtcggggacacggtggccctgcagtgc
aaggccctgggcagcccgcccccccgcatcacctggctacgcaatgacctgcccctgcgc
ccctccgacagacaccactttaccccggggaaccagctgctggtcatcggctcggcctcg
ctcgaggatgccggtcgctacacctgcctcatgtccaacacgctgggcacggagcgcgcc
cacagcaagctagtggtgacgcagcgcagaggtccctgcaccgccgcgccgggccccagc
acggtcactattgggatcatcgtcatcgccgtggtgacgagcattgtggtgacgtcgctg
gtgtgggtgtgcatcatctaccagaccaggaagaagagcgaggagtgcagcgtcaccaac
acagatgagacgaacgttcctccagacgtgcccagttacctctcctctcagggcactctg
tccgagcggcaggatgtgtgtatccgtgtggaggccagcggtggacctcagcccaacgga
cacatcgtagacaccgcaggtttcgacggtgcagttgtgtgcacagattgtatggagaac
agtaactgctactccaaagatcctgattacctgacgcacggttttggccctgctggaggc
atggagtaccagcagcaccctgtccccccgccttactctcacttttacccagcggagcat
catgacacagggtcgacgccactctgcaacgggacgcccaacgggatccggaacagtcag
gaatccacatttcgagaaaaccacaatacgttacaagtgaaccatcatgataaaaaaggg
agcagagcgggacagacgccggcgtgctcgccatcgcaggaggagtccttccataaaccg
gtgaagctggccggcgtgacgagcaacggtcgctccgacacggactgtgagcctgagctc
agacagactctgctgtccaacggacacgccctcagagcgtctcagaatgagagcaccccc
ctgaggagagccagcgactag
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