Hippoglossus hippoglossus (Atlantic halibut): 117761386
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Entry
117761386 CDS
T07778
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117761386
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117761386
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
CC149
Motif
Other DBs
NCBI-GeneID:
117761386
NCBI-ProteinID:
XP_034441120
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Position
5:2549905..2551671
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AA seq
559 aa
AA seq
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MAQQENQLDRERFCCSICLDLLKDPVTTVCGHSYCMSCINTHWDKEEERGSYSCPQCRQT
FTPRPVLGKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDFCTGRKRKALKSCLVCL
ASYCEKHLQPHLQSAPFKKHKLVEPSEKLQENICSRHDEVMKIFCRTDQQCICYLCSMDE
HKDHDTVSAAAERTERQRELGLRRQTIQQRLQDTEKDVKLLQQEEEAVNGSADKAVEDSE
KIFTELIRLLEKRSSDVKQQIRSQQETEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHTQFLHNYPSLSPLSESTHSSSIRIRPLRTFEDVTAAVSQVRGRLQDILSETGTKILQI
VSQVDVLLPQPEPETRADFLKYSQEITLDPNTAHRHLLLSEGNRKVTGMSKEQSYSYHPD
RFTDWRQVLSRESLTGRCYWEVEVEVGVRAVGVAVTYKNISRAGNSDECRFGFNDKSWSL
YCYENRYEFYYNSIRTPVSGPWPSRVGVYLDHRAGVLSFYRVSDTMTLLHRVQTTFTQPL
YAGVWVCYYGDTAELCKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcaactggacagagaaagattctgctgttcgatctgtctggat
ctactgaaggatccggtgactactgtctgtggacacagctactgtatgagctgtattaac
acccactgggacaaagaggaggagagaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctgtcctggggaaaaacaccatgttagctgatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgcactgggagaaaacggaaagctctcaagtcctgtttggtttgtttg
gcctcttattgtgaaaaacacctccagcctcatcttcagtcagctccatttaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatattctgccgcactgatcagcagtgtatctgttatctctgctctatggatgaa
cataaagaccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagactccaggacacagagaaagatgtgaagctg
cttcaacaggaggaggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctgctggagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacacccagtttctacacaactacccctcactgtcaccactcagtgaatctacacac
tcatccagcatcaggatccgtcctctgaggacctttgaggacgtgacagcagctgtgtca
caggtcagaggtcgactacaggacattctgagtgagacagggacaaagattttacagatt
gtgtctcaagtggatgttttactgccacaaccagagccagagaccagagctgacttctta
aaatattcacaggaaatcacactggatcctaacacagcacacagacatctgttattatct
gagggaaacagaaaagtaacaggtatgagtaaagaacagtcttattcttatcacccagac
agattcactgattggcgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggaggtggaggtgggggtgagagcagttggtgtagcagtcacatacaagaatatc
agcagagcaggaaactcagatgaatgtagatttggattcaatgataaatcttggtcatta
tattgttatgaaaacagatatgaattttattacaacagcatcaggactccagtgtcaggt
ccttggccctccagagtaggagtgtacctggatcaccgtgcaggtgttctgtccttctac
agagtctctgacaccatgactctcctccacagagtccagaccacattcactcagcctctc
tatgctggagtttgggtttgttattatggagacacagcggagttgtgcaaactcaaatag
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