Hippoglossus hippoglossus (Atlantic halibut): 117761433
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Entry
117761433 CDS
T07778
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117761433 (cntn3b)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Contactins
117761433 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
Kre9_KNH
Interfer-bind
Pox_C7_F8A
Mfa1
Motif
Other DBs
NCBI-GeneID:
117761433
NCBI-ProteinID:
XP_034441222
LinkDB
All DBs
Position
5:complement(24997619..25051068)
Genome browser
AA seq
1026 aa
AA seq
DB search
MMLPWKQIVLLSITGCLAVCTEDVIFQGPRWRTEPSDLILPINSPDQQATITCEAEGGPL
LQYRWSLNGTLIDLGNDYRRHMSGGSLIISKLDKDQDTGLYQCTAFNTWGSILSRRASLQ
FAYLDQFKTQAVRSAVNVREGQGVVLLCGPPAYSGELAFAWIFNEYPFFVQQDSRRFISQ
ETGSLYITKVEPSDVGNYTCVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAILEIPNFQQEDAGTYE
CMAENRRGKNAARGRISFHAKPHWLQTMTDTALSIEENLFWECKANGKPKPSYSWLKNGE
QVLGEGRVQIENGALSIAALNVSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPLR
ALLKARSGSEVTLECRPQASPPAISLWKKGNEILQRSERITLLPNGTLKITNVTRRDAAS
YTCIAKNQFGTASTTGRLLITEPTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLSHGGKYVCAIDTDVESLSTSAILVVKG
PPGPPDKVSVEEITDSTAQLTWTPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVVNGN
MLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAAISTTGVARYVFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIGAVYSAEEVPSVAPKRVRARSVSAAQIEVIWETLPAVPERVLGY
EVVYWEDDTKPDTVGKVRISGNYTLVNITGLKANTVYYLSVAAFNTAGPGPQSAPINTTT
KKPPPDRAPLNIQWTMIGSTLTLHWDPVVAMETESKVTGYLVLLKRNRYNDISTILTNKT
TVELSLSSNDNYLIQIKATSEGGEGVGSEPIHIHKLSMGARGSGASPLSPLYLPAVLISA
LLCSIW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaccatggaaacaaattgttctgctatcaatcactggatgccttgcagtctgt
acagaggatgtcatatttcaagggccaagatggaggacggagccaagtgacctcatttta
ccaatcaactccccagaccagcaggctaccatcacgtgtgaggcagaagggggtcctctt
ctgcagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaaactggacaaggaccaagacaccgggctg
taccagtgcacggccttcaacacatggggctccatcctcagccgcagagccagcctccaa
tttgcatatcttgatcagttcaaaacccaagctgtaaggagtgctgtcaacgtccgtgag
ggccagggagtggtactgctttgtggaccgccggcatattctggagagctggcatttgca
tggatcttcaacgaatacccgttctttgtccaacaagacagtcgtcggttcatctctcag
gagactgggagtctgtacatcactaaagtggagccctcagatgttgggaactacacctgt
gtggtgaacaacaccgtcacgagggagaaggtgctcagctctccaacacccctggtcctc
agaagtgatggagtaatgggtgaatacgaacctaaaatagaagttcattttcctgactca
gttccagctgcgaaggaatcggtagtgaaactggaatgcttcgctctgggaaaccccgtc
ccagaaataagctggaggagaaccagcggcgtccctttccccagcaaagtcaagatgaag
aattcaaacgccatccttgaaatccctaatttccagcaggaagacgcggggacgtacgag
tgcatggcagagaatcgacgaggcaaaaatgcggcgcggggccgtatttcattccatgct
aaacctcactggctccagacaatgacggacacggctttgtccatcgaggaaaacctcttc
tgggagtgtaaggccaatggaaagcctaaaccgtcctacagctggttgaagaatggggag
caggtgctgggtgagggccgggtgcaaatcgaaaacggggccctttctatagcagcgcta
aacgtgtcagactctgggatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagtgcccaactaatggtgttagcctcacctcccagcttctccaaaagtccgttgagg
gccttgctaaaagctcgctcaggcagcgaagtcactctcgaatgcaggcctcaggcctcg
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagagaagtgaaaggatt
actctgcttcccaacggaacattaaagatcaccaatgtcaccagacgggacgcggccagc
tacacctgcatcgctaagaaccagtttgggacagcaagcaccactgggcggctgctcatc
actgagcccaccagaatcaccatgaggcccactaacatggagattattgttggcgagagc
atcgtgctaccctgccagattgcctgcgatccagcgctggatgtgtctttctcgtgggca
ttcaacggccagctcatcgacttccagcgagacagcgatcattttgaaagagtgggcggg
agtatatcaggggatctgatgattcgtaacatccagctaagccacggtgggaagtacgtc
tgcgctatagacactgacgtggagagcctgtccacctctgcaatcttagttgtcaaaggt
ccaccaggtcccccggacaaggtgtcggtggaggagatcacagacagcacggcccagctt
acctggactcctggtcgagacaacggcagccccatcacaggctacatcatccaggcccgg
acgccttttacagtgggctggcaggctgttgacacagtgccggaggtagtgaatgggaac
atgctgacagccacagtggtgggtctgaatgcctgggtggagtacgagttcagggtggtg
gctcgcaacgccgtgggcctgggggagcccagcccggcctcggccaagaccaggactgag
gatgccattcctgatacagctcccactgatgttggaggtggaggcggcacaaagtctgaa
ttagtgataacatgggagcctgtgccagaggaactgcaaaatggagagggctttggctac
atcatcgccttcaggccggtgggcacggtcacgtggacgcgggcggccatctccacgacg
ggcgtggcacgctacgtcttccgcaacgacaccatcccgcccttctcgcctttcgatgtg
aaagtgggggcatacaacaaccgaggggaggggcccttcagctcgattggcgccgtgtac
tcagcagaggaagtccccagtgtagctccgaagagggttagggcgagaagtgtgtctgca
gcacaaattgaagtgatctgggaaactctgcctgccgtccctgaaagagtgcttggatac
gaggttgtgtactgggaagacgacaccaagcctgacactgttggcaaagtgcgcatatct
ggaaactacacgctggttaacatcacagggctgaaagcgaacacagtgtactacctctct
gtggctgctttcaatacagctggccccgggccgcagtcggcacccatcaacaccaccaca
aagaaaccacccccagacagggctcccctgaacatacaatggaccatgattggctccaca
ctcacgctgcactgggatcccgtagtagccatggagacagagtcaaaggtcactggatat
ttggtgctgctgaaaagaaatcgctacaacgacatcagcactatcttgaccaacaaaacc
actgtggagctcagcctttcctccaacgacaactatctcattcagatcaaggccacgagc
gagggcggtgaaggtgtgggcagcgaacccatccacatccacaaattaagcatgggcgcg
cgaggctcaggagcgagccccctcagcccattgtacctccctgcagtcctcatcagtgca
ctgctctgctccatctggtga
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