Hippoglossus hippoglossus (Atlantic halibut): 117762184
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Entry
117762184 CDS
T07778
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117762184
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117762184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
117762184
NCBI-ProteinID:
XP_034442592
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Position
5:complement(1003996..1005672)
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AA seq
558 aa
AA seq
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MAQQENQRDREMFCCSICLDLLKDPVTTGCGHSYCKSCINTHWDKEEERGSYSCPQCRQT
FTPRPVLRKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHLQSAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVEE
HKDHDTVSAAAERTERQRELGLRRQTIQQRVQDTEKDVKLLPLEEEAVSGSADKAVKDSE
KIFTELIRLLEERSSDVYQQIRSQQETEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHNQFLHNYPSLSPLSGSTHSSSIRIRPLRTFEDVTAAVFQVRGRLQDILSETETEILQI
VSQVDVLLPQPEPETRADFLRYSQKITLDPNTVNEDLLLSEGNRKVTVMSEDQYYSNHPD
RFTGWPQVLSRESLTGRCYWEVKMRRGGRVGVAVTYKNIRRAGGSDECGFGLNNKSWSLS
CYGNSYDFYYNSINTPVSGPVSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPLY
AGVGIYYDGDTAELCKLK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcaacgggacagagaaatgttctgctgttcgatctgtctggat
ctactgaaggatccggtgactactggctgtggacacagctactgtaagagctgtattaac
acccactgggacaaagaggaggagagaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctgtcctgaggaaaaacaccatgttagctgatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctcaagtcctgtttggtttgtttg
gcctcttattgtgaaaaacacctccagcctcatcttcagtcagctccattgaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggaggaa
cataaagaccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagagtccaggacacagagaaagacgtgaagctg
cttccactggaggaggaggccgtcagtggctctgctgataaagcagtgaaggacagtgag
aagatcttcactgagctgatccgtctgctggaggaaagaagctctgatgtttatcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagtggatctacacac
tcatccagcatcaggatccgtcctctgaggacctttgaggacgtgacagcagctgtgttc
caggtcagaggtcgactacaggacattctgagtgagacagagacagagattttacagatt
gtgtctcaagtggatgttttactgccacaaccagagccagagaccagagctgacttctta
agatattcacagaaaatcacactggatccaaacacagtaaacgaagatctgttattatct
gagggaaacagaaaagtaacagtaatgagtgaagatcagtattattctaatcacccagac
agattcactggttggcctcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtgaagatgaggagaggaggaagagttggtgtagcagtcacatacaagaatatcaga
agagcaggaggctcagatgaatgtggatttggattaaataataaatcttggtcattatct
tgttatggaaacagttatgacttttattacaacagcatcaacactccagtgtcaggtcct
gtgtcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagc
gtctctgacaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggagttgggatttattatgatggagacacagctgagttgtgtaaactcaaatag
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