Hippoglossus hippoglossus (Atlantic halibut): 117762740
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Entry
117762740 CDS
T07778
Symbol
lrrc4.2
Name
(RefSeq) leucine-rich repeat-containing protein 4.2
KO
K16351
netrin-G2 ligand
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117762740 (lrrc4.2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
V-set
ig
LRRNT
Ig_2
Sp38
Motif
Other DBs
NCBI-GeneID:
117762740
NCBI-ProteinID:
XP_034443203
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Position
6:complement(11599900..11605273)
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AA seq
665 aa
AA seq
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MSPLGQVSLQPTWNAALLAVLSLMVPALSMCQSTGPVLGSANPQNCPGMCSCTNQLSKVV
CTRRGLVRVPPNIPTNTRYLNLMENSIETIQADTFRQLHHLEVLQLGRNSIRQIEVGAFN
GLTSLNTLELFDNRLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRKLEYISDGAFEGLQNLKYLNLGMCNLREFPHLSPLVGLEELEISENLFPELKPGAFRG
LKNLRKLWIMNSAITTIERNAFDDITALVELNLAHNNLSSLPHNLFTPLQYLVELHLHHN
PWRCDCDVVWLSWWLREYIPTNSTCCGRCHTPTHMKGRYLVEVDQTTFQCSAPFIVDAPR
DLNISAARVAELKCRTAAMSSVRWLLPNGTVLTHGSDHPRISVLNDGTLNFSNVLPSDTG
VYTCMVSNMAGNSNASAYLNVSNAELNTSNLSYFTTVTVEFLEPTVEETPKPGPTVPASP
SVFQPVFISTPTVLFQNTQTPRQVSIPTARVPSGPAASLDEVMKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKRHQQRSTVAAARTIEIIQMEEEVHPVPPPTSGSSGSDDTGLVLPTLVE
HNSNLFRPGYVSTSSSRQGGYGAHWTQNNSLHRSVRQHHSHISTIADPYVIKTSHGKEKV
QETQI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctctgggccaggttagtttgcagcctacctggaacgcagccctgctcgccgtg
ctctccctcatggtgcctgctctcagtatgtgccagtccacaggccctgtgttgggctcg
gctaacccacagaactgtccaggtatgtgctcctgcactaaccagctcagcaaggtggtg
tgtacacgcagaggcctggttagggttcctccaaacatcccaaccaacaccaggtacttg
aacctgatggaaaacagcatagagactatacaagcagatactttcagacaactgcatcac
ctggaggtactgcagttgggcagaaattccataaggcagattgaagtgggggctttcaat
ggcctgaccagcctcaataccttggagctgtttgacaacagactgacggtcataccaagt
ggagcgtttgagtacctgtcaaagttaagagagttgtggcttagaaacaaccccatcgag
agcatcccctcgtatgccttcaaccgtgtcccctcactcatgagactggacctgggagag
ctgagaaaattggagtacatttccgatggggcattcgagggtcttcaaaacctcaagtac
ctcaacttggggatgtgcaacctgagggagtttcctcatctgtcacctctggtgggattg
gaggagctagaaatatcagagaatcttttccctgaactgaagcctggggctttccgtggg
ctcaagaatttacgtaaactatggattatgaactctgccatcactaccattgagaggaat
gcatttgatgacatcacagccttggtggagctcaacttagcccataacaacttgtcatcc
ctcccccacaacctcttcacccctctgcagtacttggtggagctacacctgcaccacaac
ccttggcgatgtgactgtgatgtagtgtggctctcctggtggctcagagaatacattcct
acaaattccacctgctgtggacgctgccacaccccgacccacatgaaaggacgatacctg
gtggaagttgatcagaccacctttcaatgttccgcaccgttcatagtggatgctcccaga
gatctgaacatctcagcagcgagggtggcggaactgaagtgtcgcacagctgccatgagc
tccgtccgatggcttctccccaatgggaccgtcttgacccatggttcagatcacccacgg
atatctgtccttaacgatgggacactcaatttctccaacgtcctcccatcagacacaggg
gtctacacctgcatggtgagcaacatggctggaaattcgaatgcctcagcctacctaaat
gtcagcaatgccgaactcaacacatctaacttgtcctactttaccacagtaacagtggaa
tttttggagcccacagtggaggagacccctaaacccgggcctacagtccctgcctcgccc
tccgtctttcagcccgtcttcatttccacaccaaccgtgttgttccaaaatactcagact
ccaaggcaggtgtcaattcccactgccagagttcctagtgggccagccgccagcctcgat
gaggtgatgaaaacaaccaaaatcatcattggatgttttgttgccgtaaccttactggca
gcggccatgttgatagcgttctataagttgcgtaagcggcatcaacagaggagcacggtg
gcagcagccaggaccatagaaatcatacagatggaggaagaggttcatcctgttccacca
cccacctctggatctagtggctcagatgacacagggttggtactgcctactttagtggaa
cacaacagcaacctctttaggcctgggtacgtgtccacctcctcatcccgccaagggggc
tatggggcccactggacccagaacaactctcttcatcgctcagtcagacagcatcacagc
cacatcagcaccattgctgatccttacgtcattaagacttctcacggcaaggagaaggtt
caagagacccaaatctga
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