Hippoglossus hippoglossus (Atlantic halibut): 117766254
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Entry
117766254 CDS
T07778
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117766254
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117766254
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
117766254
NCBI-ProteinID:
XP_034449012
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All DBs
Position
8:20420995..20459892
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AA seq
465 aa
AA seq
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MLMSTDVASIMLPVSRGIMDRERELDAAAGPLANAPGGPAAVRATKRGDPEPDAQTPAAP
LTDLPGAECKRPRIDGTGAVVADIGQNNEPLNPGFHGYPALTQGSQDSTGGQEGLVAPPF
AAFPPPPPPQNGLPGTEFVPGAMFGAGGPGTVEVGVGADGTATAAIINNSNSVKAEEESQ
GEVGVQCGTGGTGAGGSTGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEI
IFNERGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNG
EALSTLPYAGWKLSPMVSAMYGPELYAVPGFPYSSAAAAATTAAAAFRGAHLRGRGRPVY
STVRAAVPQPTLPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAYRYAQPTAVAGATAAA
AAYSDSYGRVYTTDPYHALSPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcctccataatgctgcccgttagtcgggggatcatggat
cgggagagggagctcgacgcggccgccggacccctcgccaacgcgcccgggggtccggca
gctgtccgggcgacgaagcgaggggacccggagcccgacgcgcagacacccgccgcccca
ctcaccgacctgcccggggcggagtgcaagagaccgaggatagacgggaccggggctgtt
gttgctgacattggccagaacaatgagcctttaaaccctggtttccatggatacccagct
ctcactcagggctctcaggattcgacaggaggacaggagggtctggtggccccacccttc
gcagcattcccccctccacccccacctcagaacgggctcccggggacggagtttgttccg
ggggccatgtttggcgctgggggcccaggaacagtagaggtgggggttggcgctgatgga
acagccactgcagccatcatcaacaacagcaacagcgtaaaggcagaagaagaatcacag
ggcgaggtgggggtgcagtgtggtaccggaggcaccggagcaggcggctccaccggcgac
ccctcggaggccaaagggacccccaaacgcctccacgtctccaacatccccttccgcttc
cgggacccagatctcaggcagatgtttgggcaatacgggaagattctggatgtagagata
attttcaatgagaggggttcaaagggctttggctttgtgacgtttgagaccagcgcagac
gcagagaaagccagggaaaagctccacggcacattggtggaaggtcgtaagattgaggtg
aataacgccaccgccagggtgatgactaacaagaaaatggtcagcccttaccctaacgga
gaggctctcagcacactgccttacgcgggttggaaactgagtccgatggtgagcgccatg
tacggacccgagctgtacgcagtccccgggttcccctactcttcagcagcagcggcagcc
acaacagcggcggcagcgttccgcggcgcccaccttagaggccggggtcggcccgtctac
agcaccgtacgggccgctgtgcctcagcccaccctccctgcgtaccctggcgtggtgtat
caggatgggttttacggagctgcggacttgtatggaggctaccctgctgctgctgccgcg
gccgccgccgcttaccgctacgcccagccgacagccgtagctggagcaaccgccgctgct
gccgcctacagtgacagttatggccgggtttacactacagatccataccacgcgttaagt
ccagctgctgctgcttacggagtcggagccatggccagtttgtaccgggcaggatacagt
aggttcgctccgtactag
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