Hippoglossus hippoglossus (Atlantic halibut): 117766611
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Entry
117766611 CDS
T07778
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117766611 (lmx1al)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117766611 (lmx1al)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117766611
NCBI-ProteinID:
XP_034449712
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Position
8:14746555..14765316
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AA seq
410 aa
AA seq
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MLPTEISGGVCFTSSDHTEGRREGMKTEESQQSCLQQPPSSTPFGPEFRRGGEVCAGCES
PIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRQLYCKHDYEKLFVRKCSACLQV
IGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYEKEREMLAAISP
TPTESMKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAFKASFEVSAKPCRK
VRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQLGGTRRGQSRGGRQ
SNDDSEDGSSTHGMDGILGYASLPRQQLLALDPNIYGGEPFRHGLTPPQLTSEQLHSYDS
ETVFHDLDSDGSLGHLGDCLLATGDGGLLPGRVGNPIDRLYSMQNSYFTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaccgagatttcaggaggagtgtgtttcacctcaagcgatcacactgaggga
aggagagaagggatgaaaacagaggagagccagcagtcctgtctgcagcagcctccatcc
tcaacgcctttcggtccggagttcaggcgcgggggagaggtgtgcgcgggctgcgagtct
cccatcgccgaccgcttcctgctgcgcgtgaacgagcgctcctggcacgagacctgcgtc
aagtgcgccgtgtgtttgagcgcgctcaccgggacctgttactgcagggaccgtcagctg
tactgcaagcacgactatgagaagctgtttgtgaggaagtgcagcgcctgcctgcaggtg
attggtcgctccgagctgataatgcgcgtgctgggccaggtgtaccacctgggctgcttc
agctgctgcgagtgtgagcgccggctgcagagaggtgatgagtttgtgctgaaagaaggc
caactgctctgccgcatggactacgagaaggagagggaaatgttggccgccatcagtccg
acaccaacagaatcaatgaagagtgaggatgaggatggtggagggggctccggcgggggg
aaaggtggtgatgaaggcaaggagcacaagcgttctaaacgaccacgcaccatcttgacc
acacagcagcgccgcgctttcaaggcctcatttgaagtgtctgcgaagccctgccgcaag
gtgagagagacactggctgctgagactggactgacagtacgggttgtgcaggtgtggttt
caaaaccagagagccaagatgaaaaagatcgctcgtcgacagcagcaacagcagcagcag
cagcaggagcaggagcagcttggaggaacccggagaggacaaagcagagggggccgtcag
agcaatgacgacagtgaggatggatccagtactcatggcatggatgggattctgggatat
gcctctctgccacgtcagcagctacttgctctggaccccaacatctacggcggagagccg
tttcgacatgggctgaccccgccgcagctgaccagcgagcagctccactcctatgactca
gagaccgtgttccacgacctggacagcgacgggagcctcggccacctcggcgactgcctc
ctagcaacaggggacggcggtctcctgccagggcgagtgggaaaccccatcgaccgtctc
tactccatgcagaactcctacttcacctcctga
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