Hippoglossus hippoglossus (Atlantic halibut): 117769843
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Entry
117769843 CDS
T07778
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117769843 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117769843 (rapgef2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117769843
NCBI-ProteinID:
XP_034454876
LinkDB
All DBs
Position
10:22994804..23091726
Genome browser
AA seq
1654 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSVRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTECNKP
QLPADFSRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDSRTEILCMGNSF
GVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFEGNLEKEKMCGHLRLLNIACAA
KAKPRLVTLTKPSRDSPLAFSLLGGQEKGFRVFIDAVESGSKAAEVGLKRGDQILEVNGQ
NFENVQLNKANEILKNNTHLSITVKTNLLVFKDLLTRPEQDHDLDGEEEHDRKNGAPHLP
KIGDIKKASRYSIPDLAVDVEQVMGLEKVSKKAKTNSVGGRNKLKKMFDKTLTSILPPKP
YNEVCVGQSQDDSIVGMKQSKQIAPALPVSGNLSSSNPDLLQSHHRILDFNNQPVPVIPN
LSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIK
QRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDDDAQDLLREGQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKRRSKTGSFSLKRFEEAINDETFWVATEVTREPNQLKR
MKNVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLF
DPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEI
RHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNA
KKLYEDAQMARKVKQYLSNLSLEVNEESLQTLSMQCEPSISTLPKNAGGKRPDTSPVVSR
AASQQRGQLTKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASDRH
RRQPEDTVSNASSQLSSPPTSPQSSPKKGYNRMGDAYSDSGHSEISSRSSLVSNSSFDMA
QEERRLRHSGGVGESHIVGARLERRATTDPDQYSLGSYSSMQDCRGIYAGCPTVLSSPSS
EELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGIVGLPP
GGPEAFLGGPAALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPET
SSITSTGSEEAKQHGRPSPSPITAGGKGLISRKEGRYREPPPTPPGYTALTITDLAEGQH
PAPSVPTTTAIHSGRRPPDYTTALQRSRMVTQSPDSHQAQQGAKQRSGGLHRTCSPAEDQ
KRDEEEEGESLSPKLVALRKPKRVAQHTPETPRP
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagctttcgccaggctgtgatgatgaacccggcggaacgg
acgcaacaggacctggagatcgtctactcgtacctccacgggatggaggccctgtccaac
ctgcgagagcaccagctgaggataatgtgtgagacggttcgttatgagagacacgaggcc
aacgaggtgctatactaccctgacgacattggaagctgctggtacatcctgttgtccggc
tccgtcttcattaaggagtccatgttcctgcccagaagcagttttggaaagcgatcagcg
ggcagcgtacgacgcggatgtgagtgcatcgtcctggaaccctcagagatgattgtggtg
gactatatggatgaaaatgaggagtactttcagcggcaggcatcgcacagacaatcccgt
cggcgctttcggaagatcaaccagaagggggagaggcagacaatcattgacacagtggat
ccgtaccccaccgggaagccgcccatagcccggggataccacacggaatgcaataaacct
cagctccccgcagacttcagccgacttcacctggccgacggcttgcacccacaggtgacc
cacgtctcctccagccactcaggatgtagtatcaccagcgactctggaagcagcagcctg
tcagacatttaccaggccacagagaacgaacccggtgacatggacctgagtggcctgccg
gagaccgctgtggactccgaggaggacgacgatgaggaggatatcgagcgagcgtcggac
cccctcatgagccgggacattgtgcgtgactgcctggagaaggacccgatggacagaacc
gatgatgatatagagcaattactggagttcatgcatcaactgccagcgtttgcaaacatg
accatgtcagtgaggagggaactctgcgccgtcatggtttttgctgtggtggaacgcgcc
ggcaccatcgttctcaacgatggagaggagttggattcctggtcagtgattctcaacggt
tcggtggaagtgacgtatcccgacagccggacggagatcctgtgtatggggaacagcttt
ggggtgtcaccgaccatggagaaggaatacatgaagggtgtgatgaagaccaaggtggac
gactgccagtttgtgtgcatagcccagcaggactactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtcgaggaggaaggtgagatcgtcatggtgaaggaacaccgcgag
ctggatcgcaccggcaccaggaaaggacacatcgtaatcaagggcacgccggagcgtctc
accatgcacctagtggaggagcactcggtggtggaccccacgtacatcgaggacttcctg
ttgacctacaggaccttcctctccagccccatggtcgtgggcaagaagctcctggagtgg
ttccatgaccccagtctcagggacaaggttacacgggtagtcttgctgtgggtaaacaat
cacttcaatgactttgagggtgaccctgccatgactcactttctggaggagtttgaaggc
aatctggagaaagaaaaaatgtgtgggcacctcagactgttaaatatagcatgtgctgct
aaagccaagccgcggctggtgacactgaccaagccgtccagggactctcctctggcgttc
agcctgctcggaggtcaggagaaaggttttcgcgtctttatcgatgccgtggagtccggg
agcaaagctgcagaagtcggccttaagcgtggagatcagatcttagaggtcaatgggcag
aactttgagaacgtccagctcaacaaagccaacgagatcctgaagaacaacacacacttg
tccataactgtgaaaacaaacctcttagtgtttaaagatcttctaacgaggcctgaacag
gaccacgacctggacggcgaggaggaacacgacaggaagaacggggcgccacacctcccg
aagatcggagacatcaagaaggccagccgctactccatccccgacctggcggtggacgtg
gagcaggtgatgggcctggagaaggtcagcaagaaggcgaagaccaactcggtgggagga
cgcaacaagctgaagaagatgtttgacaagacgctcaccagcatcctgcctcccaaacca
tacaatgaggtttgcgtgggccaatcgcaggacgacagcatcgtggggatgaaacagtcc
aaacagatcgcaccagctctgcccgtcagtggaaacctgtcgtcgtcaaaccccgacctg
ctgcagtcgcaccaccgcatcctcgacttcaacaaccagccagttccagttataccgaat
ttgtcagaccaggtattacgagtcttcaaggccgaccagcagtctcggtacatcatgatc
gggaaggacacgacggcgaaggaggtggtggcccaggctatcagggagtttgccctgacg
gcagcagcggaggcttattcgctgtgtgaggtgtccgtcacgccggagggcgtcatcaag
cagaggcgattaccagaccagctttctaaactcgccgacaggattcagctcagcggcaga
tactacctgaagagcaacatggagacggagacgttatgttcagacgacgacgcccaggac
ctccttagggaaggccagatctctctgttacagctcagcacggtggaggtggccactcag
ctctcgatgcgggcttttgaacttttctgtgccatcgagcccaccgagtacatcgacgac
ctgttcaagcggcgctcgaagacgggctcgttcagcctgaagcgcttcgaggaggccatc
aatgacgagaccttctgggtggccacggaggtgacgcgggagcccaaccagctcaaacgc
atgaagaacgtcaagcacttcatcaagatcgccctgcactgccgcgagtgcaagaacttc
aactccatgtttgccatcatcagtggtctgaacctggctccggtctccagactgaggggg
acgtgggaaaagctaccgagcaagtatgagaagctgttcggggacctgcaggaccttttc
gatccttccagaaacatggccaagtacaggaatgtgctcaacaatcaaaacctccagcca
ccaatcatccccttgttccccgtcatcaagaaggacctcaccttcttacacgaaggcaat
gactctaaagtggacgggctggtgaacttcgagaagctgaggatgatcgccaaagaaatc
cgccatgttggtcgcatggcttccgtcaacatggacccggccctcatgttccggacaagg
aagaagaagtggagaagtttaggctctctaagccagggtagtgccaatgcggcggtgctg
gacgtcacacagacgggcgggcacaagaagcgggtgcgtcgcagctccttcctgaacgcc
aaaaagctttacgaggacgcccagatggccaggaaggtcaagcagtacttgtccaacctc
agcctggaggtcaacgaggagagtctgcagacgctctcgatgcagtgtgaaccctccatc
agtacgctgcccaagaacgccggtgggaaacgaccagacacgtccccggtcgtgtctaga
gctgccagtcaacagagggggcagttgaccaaaggaaatcaggctctccaggtccctgcc
gtggcactttacccatcccgaaagaaggttccagtcaaagatctgccgcctttcggcacc
agttctccgcaatctctgaagaagatcctgtcgctgtcggaggaggcgagcgacagacac
cggaggcagccagaggacacagtgtccaacgcctcctcccagctctcctcccctcccacc
tccccccagagctcgcccaagaagggttacaaccggatgggcgacgcctactcagactct
ggtcacagtgagatctcgtctcgctccagcctcgtcagtaactcgtctttcgacatggcc
caggaggagaggaggctccgccactccggaggagtcggggagtctcacatcgtgggagcg
cggctggaacgaagagccaccactgaccccgaccagtacagccttgggtcatattcctcg
atgcaggactgtcggggtatttacgccggctgcccgacggtgctctcttcgcccagctca
gaggagctcactcaggatcagggcgaccgtgtttcactcgacgctgcagacagcggccgc
ggctcctggacttcgtgctcctccggctcccacgacaacatccaaacaatgcagcagggg
cgcagctgggagactctggccttcggtggaggcggaggtggaatcgtaggactccctccc
ggcggaccagaggccttcttgggaggacctgcagcactgtgggcggcgcaggccaggggg
agctgggcgtctgccagctcctcgtcatcctccgccgcgtactggggagaggactctgag
ggcgacaccggcaccatcaagagaagaggagggaaggacgtcaatgctgacccagaaacg
agtagcatcacatccaccgggtcagaggaggccaagcagcacggccggccgtctccatca
cccatcaccgctgggggtaaaggcctcatttcacgaaaagaaggccgataccgtgagcct
ccccctaccccccctggctacacggccctgaccatcaccgacctcgcggagggtcagcat
ccggctccgtctgtccccacgaccacagcgatccactcaggccgccggccacccgactac
accacggctctgcagcgctcgcgtatggtcacccagtcccccgactcccaccaggcccaa
cagggggcaaaacagcggtcgggcggcctccaccgcacctgctcgccagccgaggaccaa
aagcgcgatgaggaagaggagggtgagtccttgtctcccaaactagtcgctctgaggaag
ccaaagcgagtggcacagcacacacctgagactcccagaccatga
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