Hippoglossus hippoglossus (Atlantic halibut): 117774291
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Entry
117774291 CDS
T07778
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774291
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117774291
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117774291
NCBI-ProteinID:
XP_034462489
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All DBs
Position
14:1074966..1076645
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AA seq
559 aa
AA seq
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MAQQENQRDRERFCCSICLDLLKDPVATGCGHSYCMSCINTHWDKEEERGSYSCPQCRQT
FTPRPVLGKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLNCL
ASYCEKHLQPHLQSAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKDHDTVSAASERTERQRELGLRRQTIQQRVQDTEKDVKLLQQEEEAVNGSANKAVEDSE
KIFTELIRLLEKRSSDVKQQIRSQQETEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHNQFLHNYPSLSPLSESTHSSSIRIRPLRNFEDVTAAVSQVRGRLQDILSETETEILQI
VSQVDVLLPQPEPETRADFLRYSQEITLDPNTVNKYLLLSEGNRKVTCMREGQSYSNHPD
RFTYWPQVLSRESLTGRCYWEVEVKVGVRGGVSVAVTYKNISRAGRSLECLFGFNDKSWS
LYCNVNSYIFRYNSIDTPVSGPVSSRVGVYLDHSAGVLSFYRVSDTMTLLHRVQTTFTQP
LYAGVRVYSGATVELCKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcaacgggacagagaaagattctgctgttcgatctgtctggat
ctactgaaggatccggtggctactggctgtggacacagctactgtatgagctgtattaac
acccactgggacaaagaggaggagagaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctgtcctggggaaaaacaccatgttagctgatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctcaagtcctgtttgaattgtttg
gcctcttattgtgaaaaacacctccagcctcatcttcagtcagctccattgaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaagaccacgacacagtgtcagctgcatcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagagtccaggacacagagaaagatgtgaagctg
cttcaacaggaggaggaggccgtcaatggttctgctaataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctgctggagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagtgaatctacacac
tcatccagtatcaggatccgtcctctgaggaactttgaggacgtgacagcagctgtgtcc
caggtcagaggtcgactacaggacattctgagtgagacagagacagagattttacagatt
gtgtctcaagtggatgttttactgccacaaccagagccagagaccagagctgacttctta
agatattcacaggaaatcacactggatccaaacacagtaaacaaatatctgttattatct
gagggaaacagaaaagtaacatgtatgagagaaggacagtcttattctaatcacccagac
agattcacttattggcctcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggaggtgaaggtgggggtgagaggaggagttagtgtagcagtcacatacaagaat
atcagcagagcaggacgctcacttgaatgtttatttggattcaatgataaatcttggtca
ttatattgtaatgtaaacagttatatctttcgttacaacagcatcgacactccagtgtca
ggtcctgtgtcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttc
tacagagtctctgacaccatgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggagttagggtttattctggagccacagttgagttgtgtaaactcaaatag
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