Hippoglossus hippoglossus (Atlantic halibut): 117774974
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Entry
117774974 CDS
T07778
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774974
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117774974
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117774974
NCBI-ProteinID:
XP_034463639
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Position
14:1606545..1608264
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AA seq
559 aa
AA seq
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MAQQENQRDRERFCCSICLDLLKDPVTTGCGHSYCMSCINTHWDKGEETGSYSCPQCRQT
FTPRPVLGKSTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQPHLQSAPFKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVEE
HKGHDTVSAAAERTERQRELGLRRQTIQQRVQDTEKDVKLLQQEEEAVNGSADKAVEDSE
KIFTELIRLLEKRSSDVKQQIRSQQETEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHNQFLHNYPSLSPLSGSTHSSSIRIRPLRTFEDVTAAVSQVRGRLQDILSETETEILQI
VSQVDVLLPQPEPETRADFLRYSQEITLDPNTAHRRLLLSEGNRKVTCMSKEQSYSNHPD
RFTVRTQVLSRESLTGRCYWEVEVEVGVRAVSVAVTYKNISRAGNSRECGFGYNDKSWSL
SSYVNSYNFRYNSIDTPVSGPVSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPL
YAGVWVYYPGATAEFCKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcaacgggacagagaaagattctgctgttcgatctgtctggat
ctactgaaggatccggtgactactggctgtggacacagctactgtatgagctgtattaac
acccactgggacaaaggggaggagacaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctgtcctggggaaaagcaccatgttagctgatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgaaagctctcaagtcctgtttggtttgtttg
gcctcttattgtgaaaaacacctccagcctcatcttcagtcagctccatttaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggaggaa
cataaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagagtccaggacacagagaaagatgtgaagctg
cttcaacaggaggaggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctgctggagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacaaccagtttctacacaactacccctcactgtcaccactcagtggatctacacac
tcatccagcatcaggatccgtcctctgaggacctttgaggacgtgacagcagctgtgtcc
caggtcagaggtcgactacaggacattctgagtgagacagagacagagattttacagatt
gtgtctcaagtggatgttttactgccacaaccagagccagagactagagctgacttctta
agatattcacaggaaatcacactggatccaaacacagcacacagacgtctgttattatct
gagggaaacagaaaagtaacatgtatgagtaaagaacagtcttattctaatcacccagac
agattcactgttaggactcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggaggtggaggtgggggtgagagcagttagtgtagcagtcacatacaagaatatc
agcagagcaggaaactcacgtgaatgtggatttggatacaatgataaatcttggtcatta
tctagttatgtaaacagttataactttcgttacaacagcatcgacactccagtgtcaggt
cctgtgtcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctac
agcgtctctgacaccatgactctcctccacagagtccagaccacattcactcagcctctc
tatgctggagtttgggtttattatcctggagccacagctgagttctgtaaactcaaatag
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