Hippoglossus hippoglossus (Atlantic halibut): 117774978
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Entry
117774978 CDS
T07778
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774978
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117774978
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117774978
NCBI-ProteinID:
XP_034463643
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Position
14:1639081..1640853
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AA seq
558 aa
AA seq
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MAQQENQRDRERFCCSICLDLLKDPVTTGCGHSYCKSCINTHWDKEEERGSYSCPQCRQT
FTPRPVLGKSTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
ASYCEKHLQRHLQSAPFKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKDHDTVTAAAERTERQRELGLRRQTIQQRVQDTEKDVKLLQQEEEAVNGSADKAVEDSE
KIFTELIRLLEKRSSDVKQQIRSQQQTEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHTQFLHNYPSLSPLSESTHSSSIRIRPLRNFEDVTAAVSQVRGRLQDILSETETEILQI
VSQVDVLLPQPEPETRADFLRYSQEITLDPNTVNKELLLSEGNRKVTCMSEEESYSYHPD
RFTDWRQVLSRESLTGRCYWEVEVGGRGGVSLAVTYKNISRAGDSLECLFGFNDKSWSLS
CDRNSYNFRYNSINTPVSGPLSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPLY
AGVWVYYPGATAEFCKLK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcaacgggacagagaaagattctgctgttcgatctgtctggat
ctactgaaggatccggtgactactggctgtggacacagctactgtaagagctgtattaac
acccactgggacaaagaggaggagagaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctgtcctggggaaaagcaccatgttagctgatttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgaaagctctcaagtcctgtttggtttgtttg
gcctcttattgtgaaaaacacctccagcgtcatcttcagtcagctccatttaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaagaccacgacacagtaacagctgcagcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagagtccaggacacagagaaagatgtgaagctg
cttcaacaggaggaggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctgctggagaaaagaagctctgatgtgaagcagcag
atcagatcccagcagcaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacacccagtttctacacaactacccctcactgtcaccactcagtgaatctacacac
tcatccagcatcaggatccgtcctctgaggaactttgaggacgtgacagcagctgtgtcc
caggtcagaggtcgactacaggacattctgagtgagacagagacagagattttacagatt
gtgtctcaagtggatgttttactgccacaaccagagccagagaccagagctgacttctta
agatattcacaggaaatcacactggatccaaacacagtaaacaaagagctgttattatct
gagggaaacagaaaagtaacatgtatgagtgaagaagagtcttattcttatcacccagac
agattcactgattggcgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggaggtgggggggagaggaggagttagtttagcagtcacatacaagaatatcagc
agagcaggagactcacttgaatgtttatttggattcaatgataaatcttggtcattatct
tgtgatagaaacagttataactttcgttacaacagcatcaacactccagtgtcaggtcct
ctgtcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagc
gtctctgacaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggagtttgggtttattatcctggagccacagctgagttctgtaaactcaaatag
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