KEGG   Helicobacter pylori Shi417: HPSH417_06805
Entry
HPSH417_06805     CDS       T02039                                 
Name
(GenBank) putative type III restriction enzyme R protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hhr  Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hhr02048]
    HPSH417_06805
Enzymes [BR:hhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HPSH417_06805
Prokaryotic defense system [BR:hhr02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HPSH417_06805
SSDB
Motif
Pfam: ResIII DEAD SWI2_SNF2 AAA_34 Methyltrans_RNA
Other DBs
NCBI-ProteinID: AFH98481
LinkDB
Position
complement(1401711..1404050)
AA seq 779 aa
MFEMATGSGKTLVMAGLILECYKQGYQNFIFFVNSTSILEKTKLNFIDSASSKYLFSENI
NINDENTEIKSINNLNESQASAINIYFSTIQGLFSLFTKAKENAISIEDLKYQKLVFLAD
EAHHLNTETKKKLSDAESSEKRNWESVVKLALEQNKDNLLLEFSATIPNEKSVKDKYKNL
KVITYTLKEFSEDKFCKNIYSLSYENKELETRFLGACVSSLYKELLAQHHNIKSFKPCIL
FKSERIEDSKENQERFNTFLENLSPLDLENFFNHSRNAFFKDAKNFFDKQKYTPNLAALL
QTKFKKSVQINTNNEKELEKSMLLLNSLEDRQNPKRVIFSVDKLNEGWDVLNLFDIVRLK
NKASQKDTTKDAQLIGRGARYYPFSYNDLKPNQIEFYQRKFDLFNPLSALERLDYHAIYD
SEFIAKLNNELQDLGLGFVNEKQTIPLTPTKRFKCYYASNTKDKKKNLFNKDYTGPVKVK
LQSLHVPLFAFGVREKKVDFKEENKGDTTYYIPHTLDKIPLNYFLKALNLKNLDFKTLKK
AFKKHAFNNKVGFIKRYISPLKTNFHKNQKFDDNKILLKLAVYIIENLKDTLLKEQDKPE
VSALELKEFETHNRSLSTSELEKDIPLYEWLLFKDMRKLDSDLERDFLGFINDHKKDLDK
KFKEWCVLRNDHFTELKVFCNIEDSPYYAQGFEPDFILFAQTHSDEFLGFTCYMEAKGEH
LKHSNAWKEEFLEMLENAALKSHNKKLDLKGLPFFTLYNRVVNSEFTTAFNQIFKDQKC
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtttgaaatggcaaccggtagcggtaaaaccttagtgatggcgggtttgattttagaa
tgctacaagcaaggctatcaaaactttatcttttttgtgaatagcactagcattttagaa
aaaacgaaattgaattttatagacagcgcctcatcaaaatacctttttagtgaaaatatc
aatatcaatgatgaaaacacagaaattaaaagcatcaataatttaaacgagagccaagca
agcgctatcaacatttattttagcaccattcaaggcttgttttcattattcactaaagct
aaagaaaacgctatcagcatagaggatttaaaatatcaaaaattagtttttttagcggat
gaagcgcaccatttaaacacagagactaaaaagaaattaagcgatgcagaatccagtgaa
aaacgcaactgggaaagcgttgtgaaattagcgctagaacaaaataaagacaatttattg
ctggaatttagcgccactatccccaatgaaaaaagcgttaaagacaaatataaaaactta
aaggtgatcacttacaccttaaaagaatttagcgaggataaattttgcaaaaacatctac
tccctttcttatgaaaataaagaattagaaacacgctttttaggggcatgcgtttcaagt
ttatataaagaattattagcccaacaccataatattaaaagctttaaaccatgcattttg
tttaaaagcgagaggattgaagatagtaaagagaatcaagagcgcttcaataccttttta
gaaaatttaagccctttagatttagaaaattttttcaatcacagccgcaacgcttttttt
aaagacgctaaaaacttttttgacaagcaaaaatacacccctaaccttgccgcattattg
caaacgaaattcaaaaaaagcgttcagattaacaccaataacgagaaagaattagaaaag
agcatgcttttattgaactccctagaagacagacaaaaccctaaaagagtgatctttagc
gtggataagctcaatgaaggctgggatgtgttgaatttgtttgacattgtcaggcttaaa
aataaagcgagccaaaaagacaccactaaagacgcccagctcataggacgaggagcgaga
tactacccctttagctataacgatttaaaaccaaaccaaatagagttttaccaacgcaag
tttgatctttttaaccccttaagcgcgctagagaggttagactaccatgctatttatgac
agcgagtttatcgctaaattaaacaacgagttgcaagatttaggattaggatttgtaaat
gaaaaacagactatccctttaacacccaccaagcgtttcaaatgctactatgcgagcaac
acaaaagacaaaaagaaaaacctattcaataaagactatacaggccctgttaaagtcaaa
ctccaaagtttgcatgtccctttatttgcttttggcgtgcgtgaaaagaaagtggatttt
aaagaagaaaataagggcgatacaacttattatataccccataccttagataaaatcccc
ctaaactattttttaaaagcccttaatttaaaaaacctggatttcaaaacgcttaaaaaa
gcctttaaaaaacatgcctttaacaataaagtgggatttataaagcgctatatttctcca
ttaaaaacaaactttcataaaaaccaaaagtttgacgataacaaaatccttttaaaactc
gctgtttatatcattgaaaacttaaaagacacgcttttaaaagagcaagacaaaccagag
gtgagcgcgttagaattgaaagaatttgaaacgcataacagaagccttagcactagtgaa
ttggagaaagacattcccctttatgaatggttgctttttaaagacatgagaaaactagat
agcgatttagaaagggattttttaggtttcatcaacgaccataaaaaggatttagacaag
aaattcaaagaatggtgcgttttaaggaatgaccatttcactgagttaaaagttttttgc
aatatagaagatagcccttattacgcgcaaggttttgagccggattttatcctttttgcc
caaacgcatagcgatgaatttttaggcttcacttgttacatggaagctaaaggcgaacat
ttaaagcattctaacgcttggaaagaagaatttttagaaatgctagaaaacgccgcactt
aaaagccataacaaaaaattagatttaaagggcttgccgtttttcacgctctataatcgc
gtggtaaatagcgaatttacaaccgctttcaatcaaatctttaaggatcaaaaatgttaa

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