Halodesulfurarchaeum formicicum HSR6: HSR6_1587 Help Entry HSR6_1587         CDS       T04550                                  Symbol ligB Name (GenBank) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism hhsr  Halodesulfurarchaeum formicicum HSR6 Pathway hhsr03030   DNA replication hhsr03410   Base excision repair hhsr03420   Nucleotide excision repair hhsr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hhsr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HSR6_1587 (ligB)    03410 Base excision repair     HSR6_1587 (ligB)    03420 Nucleotide excision repair     HSR6_1587 (ligB)    03430 Mismatch repair     HSR6_1587 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hhsr03032]     HSR6_1587 (ligB)    03400 DNA repair and recombination proteins [BR:hhsr03400]     HSR6_1587 (ligB) Enzymes [BR:hhsr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HSR6_1587 (ligB)     6.5.1.6  DNA ligase (ATP or NAD+)      HSR6_1587 (ligB)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      HSR6_1587 (ligB) DNA replication proteins [BR:hhsr03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     HSR6_1587 (ligB)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      HSR6_1587 (ligB) DNA repair and recombination proteins [BR:hhsr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      HSR6_1587 (ligB)    NER (nucleotide excision repair)     Other NER factors      HSR6_1587 (ligB)    MMR (mismatch excision repair)     Other MMR factors      HSR6_1587 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase IMPDH LXG Motif Other DBs NCBI-ProteinID:  APE96028 UniProt:  A0A1J1ACZ9 LinkDB All DBs Position 1522340..1524010 Genome browser AA seq 556 aa AA seqDB search MEYGRLVELYAELSATEANTEQTALIARTLTARPETVELLVTLLQGRPFVAWDDRDLGVS SSLTRTAIAKATGHSEAQIEEWWRETGDLGSAAARAIENDRQQTLFGQSLTVEGVQDTLE AIAAYDGAGSQERKVDAIAGLLSDAEPETAQYLVRTVLENLRIGVGEGTIRDAIAQAFLG GSEADIAAVERAYQVTNDYRTVAAVARGSGVEGLAELEIQVGRPIAVMLAEKAESVRTGM DRVAPDGPVLAEYKYDGMRAQVHVDGADVTVFTRRLADVTAQFPDVVAAVQEHVDAEQAI LEGEIVGYDPETGGTLPFQTLSKRIKRKYDLQATKTEIPVTLLLFDAMYVEESLLEAPLT QRLDRLESVLTESTQEIERARNCMSEDPAAIEALYEDALAAGQEGIMVKNPAATYQPGNR VGYMMKVKPTLETLDLVVTRATYSEGRRSNQLGRLYLGCRDASGEFKEVGRLSTGFTDEE LATVTERLEPLIVETEGRDVVLDPELVLEVEFEEIQASPEYDSSYALRFPRFVGFRDDLA VSDVDTLDRVERLYDQ NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atggagtacggccgcctggtggagttgtacgcggagctctcggcgacagaagcgaacacg gaacagacggcgctgatcgcacgcacgctgacagcgcggcccgagacagtcgaactgctc gtcaccctcctgcagggccggccgttcgtggcctgggacgatcgggatctgggcgtctcc tcgagtctgaccagaacggccatcgcgaaagcgaccggccacagcgaggcacagatcgag gagtggtggcgcgagacgggcgacctggggagcgcggccgcgagagcgatcgaaaacgac cggcaacagaccctcttcggccagtccctgaccgtcgagggagtccaggacaccctcgaa gccatcgcggcctacgatggggcgggaagccaggaacggaaagtcgatgcgatcgccggg ctgctctccgacgccgagcccgagacggcccagtacctcgtccggaccgtcctcgaaaac ctccgcatcggcgtcggtgaggggacgatcagggacgcgatcgcccaggccttcctcggg gggagcgaggccgacatcgcggctgtcgagcgggcctatcaggtcacgaacgattaccgg acggtcgcagcagtcgcccgtggttcaggtgtggaaggattggcggaactcgaaatccag gtcggccggccgatcgccgtgatgctcgctgagaaggccgaatcggtgcgcacgggaatg gaccgtgtcgctcccgacgggcccgtcctcgcggagtacaagtacgacgggatgcgagcc caggtccacgtcgacggagcggacgtcacggtctttacccgccggctggccgacgtcacg gcacagttcccggacgtggtcgcggccgtccaggagcacgtcgacgccgaacaggcaatt ctggagggcgagatcgtggggtacgatcccgaaacgggcgggacccttccgttccagacc ctctcgaagcgcatcaagcgcaagtacgacctgcaggccacgaaaacggagatcccagta accctgctgctcttcgacgcgatgtacgtcgaggagtcgctacttgaggccccgctcacg caacggctcgaccggctcgaatcggttctcacggagtccacccaggagatcgaacgggcc cgaaactgcatgagcgaggacccggcggccatcgaagccctctacgaggacgcgttagcg gcgggccaggagggcatcatggtgaagaacccggcggcgacctaccagcccgggaaccgg gtgggctacatgatgaaggtaaagcccacactggagaccctcgatctggtggtcacccgg gcgacctacagcgaggggcggcggtcgaaccagctcgggcggctctacctgggctgtcga gacgcgagcggcgaattcaaggaagtcggccggctctcgacgggtttcaccgacgaggaa ctcgccaccgtcaccgagcgactggagccactgatcgtcgagaccgagggccgggacgtg gtcctcgacccggaactcgtcctggaggtcgagttcgaggagatccaggcctcccccgag tacgactcgagctatgcgcttcgcttcccgcggttcgtcgggttccgggacgacctcgcc gtgagcgacgtggacacgctcgaccgggtcgaacggctctacgaccagtag

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