Halodesulfurarchaeum formicicum HSR6: HSR6_1965
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Entry
HSR6_1965 CDS
T04550
Symbol
dpo
Name
(GenBank) DNA polymerase bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HSR6_1965 (dpo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhsr03400
]
HSR6_1965 (dpo)
Enzymes [BR:
hhsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HSR6_1965 (dpo)
DNA repair and recombination proteins [BR:
hhsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HSR6_1965 (dpo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APE96396
UniProt:
A0A1J1AE27
LinkDB
All DBs
Position
complement(1923671..1924234)
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AA seq
187 aa
AA seq
DB search
MSEQGTIDVTDCKRCADLVESRSQIVNGVGPGDADLLFVGEAPGEQEDIEGEPFVGRSGE
ILDSVLAEYGLDRETVRITNAVKCRPPENRDPTATELANCRPHLEREVAGVDPAVIVTLG
KVPSEHLLGRSVAVTNEAGSVESITIDGTAYRVLIGLHPAATLYDPSTRETFEAVIDEAT
ELVAGLR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagggaacgatcgacgtcaccgattgcaaacggtgtgcggacctggtcgag
tcccggtcccagatcgtcaacggtgtcgggccgggggacgcggacctcctcttcgttggc
gaggcaccgggcgagcaggaggacatcgaaggcgagccattcgtcggccgcagcggcgag
atcctcgattcggtcctggcagagtacgggctcgaccgggagaccgtccggatcacgaac
gccgtcaagtgccgcccgccggagaatcgggacccgaccgcgaccgaactggcgaactgc
cggccccacctggagcgggaggtagcgggcgtggatccagccgtgatcgtcacgctcggg
aaagtgccgagcgaacatctcctgggtcggtcggtcgccgtgacgaacgaggccggcagc
gtcgagtcgatcacgatcgacgggacggcctaccgggtccttatcgggcttcaccccgcg
gcgaccctgtacgatcccagcactcgggagaccttcgaggcggtgatcgacgaggcgacc
gaactcgtggcggggttgcggtaa
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