Herbaspirillum hiltneri: F506_20450
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Entry
F506_20450 CDS
T04039
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_20450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hht02000
]
F506_20450
Transporters [BR:
hht02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F506_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
RsgA_GTPase
Rad17
AAA_22
AAA_16
PRK
AAA_30
AAA_5
T2SSE
TsaE
AAA_28
SRP54
NB-ARC
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AKZ64707
LinkDB
All DBs
Position
complement(4518610..4519626)
Genome browser
AA seq
338 aa
AA seq
DB search
MSYLELHQLALGYGKNKTAVEHLDLAVEQGELISLLGPSGCGKTTTMRAIAGLIDLRAGS
IMLDGRDIGRLPPNKRNIGMVFQSYALFPHLNVFDNVAFGLRLRKVDAVTLRSKVERVIA
AVGLSGFETRLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELCRI
QRELGITMLYVTHDQEEALALSDRIVVMNGGKIEQLDIPENLFNAPRTRFVANFMGFENL
FDYREGFLHGEGGKLPFAVAPPAGTVCAGWRPERVTVGTGPYNGTVLSRGFLGDAVEYLL
QTPVGPVKGMAAAATARWREGDSVDFALPAGQALLLQA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcttgaactacatcaactggcgctcggctacggcaagaacaagaccgccgtc
gaacacctggacctggcggtggagcagggtgaactgatctcgctgctcggtcccagtggc
tgcggcaagaccaccaccatgcgcgccatcgccggcctgatcgacctgcgtgccggcagc
atcatgctggacggccgcgacatcggccgcctgccgcccaacaagcgcaacatcggcatg
gtgttccagtcgtacgcgctgttcccgcatctgaacgtattcgataacgtcgccttcggc
ctgcgtctgcgcaaggtcgacgcggtcacgctgcgcagcaaggtcgaacgcgtcatcgcc
gcagtcggcctgagcggcttcgaaacacggctgccggcgcagatgtcgggcggacagcaa
cagcgcgtggcgctggcgcgggccatcgtgatcgagccgaagttgctgctgctggatgaa
cctctctccaacctcgacgccaaactgcgcgtgcagatgcgcgccgagttgtgccgcatc
cagcgcgaactgggcatcactatgctgtacgtgacgcacgaccaggaagaagcgctggcc
ttgtcggatcgcatcgtcgtcatgaacggcggcaagatcgagcaactggacattcctgaa
aatctcttcaacgcgccgcgcacgcgtttcgtcgccaacttcatgggttttgaaaacctg
ttcgactatcgcgaaggcttcctccacggggaaggcggcaagctgccgttcgccgtggcg
ccgccggccggcaccgtgtgcgccggctggcggccggagcgcgtgacggtcgggaccggt
ccatacaatggcacggtgctgtcgcgcggcttcctcggagatgcggtggaatatctgctg
cagacacccgtcggtccggtcaagggcatggccgccgcggccacggcgcgctggcgcgaa
ggcgacagcgtcgacttcgcgttgcctgccggccaggctctgttgttgcaggcctga
DBGET
integrated database retrieval system
