Halomonas huangheensis: AR456_13800
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Entry
AR456_13800 CDS
T04119
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hhu
Halomonas huangheensis
Pathway
hhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR456_13800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhu03019
]
AR456_13800
03009 Ribosome biogenesis [BR:
hhu03009
]
AR456_13800
Enzymes [BR:
hhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR456_13800
Messenger RNA biogenesis [BR:
hhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR456_13800
Ribosome biogenesis [BR:
hhu03009
]
Prokaryotic type
rRNA helicases
AR456_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Motif
Other DBs
NCBI-ProteinID:
ALM53234
UniProt:
W1N7B6
LinkDB
All DBs
Position
complement(3158381..3160120)
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AA seq
579 aa
AA seq
DB search
MTSTTVASPSFGDLALLPAVLSAIETLGYETPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLELSRREPQVLVLAPTRELAQQVAVSFTRYGQNLAGLEVATLCGGQEYRE
QLSALRRGAQVVVGTPGRVIDHLDRGSLKLNGLSALVLDEADEMLRMGFIDDVKRVVADT
PDDTQRVFFSATLPTEIERIVNKYLLDPVKVAIEARTTTAEGIEQRLVRVDGGAKLEALA
RIIEVEPVDAAIVFVRTRAACTTLMEQLSARGVNVASLSGDLDQSLRERTITRLKRGKID
VLIATDVAARGLDVPRITHVINYDLPQDAEAYTHRIGRTGRAGRSGIAITFAGFREGRKI
GWVEQATGQKMAVMELPDEAAIRAHRDEVFHQRVVASLTRGAEEQRALIERLVEEGHDPL
ELACAFSAMARADEAPIGRLQAPRRERNDRNERGGNRERDGRAPRRDRGPSEGMTRYRVS
VGHKDGVKPGQLVGALANEGGIEGSRIGRIDIRNAFSVVELPNSLPSSILTKMARARVAG
RALEISEDRGGSDRGGADRAPRRRRDDDGAAPVRRQSRA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacctctacgactgtcgcctcaccgtctttcggtgacttggctctgctgcctgctgtt
ctctccgctatcgagactctgggctacgaaacgccatcgcccattcaggcacagactatt
ccagctctgctggaaggccgcgacatgctgggccaggctcagactggtaccggtaagaca
gccgcttttgctttgcccctgctgtcccgtcttgaactcagccgtcgtgagccccaggta
ctggtgctggctccgacgcgtgagttggcgcagcaggttgctgtttccttcactcgttac
ggccagaacctggctggtctcgaagtcgctacgctgtgcggcggtcaagagtaccgcgaa
cagcttagcgctctgcgccgtggcgcccaggtggtggttggtaccccaggccgtgtcatc
gaccacctcgaccgtggcagcctcaagctgaacggcctcagcgctctggtgctggacgag
gcggacgagatgctgcgtatgggctttatcgacgacgtcaagcgtgtcgttgctgatacc
ccggatgacactcagcgcgtgttcttctctgcgacgctgccgaccgaaatcgagcgtatc
gtcaacaagtacctgctcgacccggtcaaggtggccatcgaagcacgtaccactaccgcc
gagggcatcgaacagcgcctggtgcgtgtcgatggtggcgccaagctggaagcgttggca
cgtatcattgaagttgagccggttgatgcggctatcgtcttcgtacgtacccgcgccgcc
tgtaccactctgatggaacagctttccgcgcgtggtgtaaacgttgccagtctgtcgggt
gacctcgaccagagcctgcgcgagcgtaccattactcgtctcaagcgcggcaagatcgat
gtgttgatcgcgaccgatgttgctgcacgtggtctggacgtaccgcgtatcactcacgtc
atcaactatgatctgccccaggatgctgaagcctatactcaccgtatcggccgtaccggc
cgtgccggtcgtagcggtattgctatcacctttgccggtttccgtgaaggccgtaagata
ggctgggtagagcaggcgacaggtcagaagatggcggtcatggaactgcctgatgaggct
gcgatccgtgctcaccgtgacgaggtcttccatcagcgtgtcgtggcatccctgacccgt
ggcgcagaagagcagcgtgcgctgatcgagcgtctggtcgaggaaggtcatgatccgctg
gagctggcttgtgccttctccgccatggcgcgtgccgatgaagcgccgattggtcgtcta
caggcgccgcgtcgtgagcgtaatgaccgtaatgagcgcggtggtaaccgcgagcgtgat
ggacgtgcaccgcgtcgcgatcgtggccccagcgaaggtatgactcgctatcgcgtgtct
gtgggtcacaaggacggcgtcaagcctggtcaactggtcggtgctctggccaatgaaggt
ggcatcgaaggttcgcgtatcggtcgtatcgatatccgtaatgccttctcggtggtcgaa
ctgcccaacagcctaccgagcagcatcctgaccaagatggctcgtgctcgtgttgctggc
cgtgcactcgagatcagcgaggaccgtggcggttctgatcgtggtggcgctgatcgtgcg
ccacgtcgccgtcgcgacgacgacggtgccgctccggtgcgtcgtcagtcacgcgcctga
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